STRINGSTRING
C3XY08_BRAFL C3XY08_BRAFL C3XZL6_BRAFL C3XZL6_BRAFL C3XZQ4_BRAFL C3XZQ4_BRAFL C3Y1J0_BRAFL C3Y1J0_BRAFL C3Y1T7_BRAFL C3Y1T7_BRAFL C3YU30_BRAFL C3YU30_BRAFL C3YZU7_BRAFL C3YZU7_BRAFL C3Z292_BRAFL C3Z292_BRAFL C3Z7P0_BRAFL C3Z7P0_BRAFL C3ZRG3_BRAFL C3ZRG3_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XY08_BRAFLProtein YIPF. (257 aa)
C3XZL6_BRAFLUncharacterized protein. (300 aa)
C3XZQ4_BRAFLUncharacterized protein. (282 aa)
C3Y1J0_BRAFLProtein YIPF. (225 aa)
C3Y1T7_BRAFLUncharacterized protein. (81 aa)
C3YU30_BRAFLPRA1 family protein. (186 aa)
C3YZU7_BRAFLUncharacterized protein. (262 aa)
C3Z292_BRAFLProtein YIPF. (283 aa)
C3Z7P0_BRAFLGolgi apparatus membrane protein TVP23 homolog. (199 aa)
C3ZRG3_BRAFLPRA1 family protein. (186 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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