(35 nodes) Tetraspanin, EC2 domain superfamily, and Protein targeting to vacuole involved in autophagy network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQE7_BRAFL	Tetraspanin. (248 aa)
	C3XQF1_BRAFL	Tetraspanin. (262 aa)
	C3XR98_BRAFL	Tetraspanin. (189 aa)
	C3XZ74_BRAFL	Uncharacterized protein. (385 aa)
	C3XZV0_BRAFL	Uncharacterized protein. (887 aa)
	C3Y041_BRAFL	Uncharacterized protein. (701 aa)
	C3Y3C1_BRAFL	Uncharacterized protein; Belongs to the CD36 family. (480 aa)
	C3Y3V3_BRAFL	Tetraspanin. (487 aa)
	C3Y5Y6_BRAFL	Tetraspanin. (509 aa)
	C3Y5Z1_BRAFL	Tetraspanin. (253 aa)
	C3Y5Z2_BRAFL	Tetraspanin. (280 aa)
	C3Y650_BRAFL	Tetraspanin. (158 aa)
	C3Y653_BRAFL	Tetraspanin. (194 aa)
	C3Y654_BRAFL	Tetraspanin. (243 aa)
	C3Y657_BRAFL	Tetraspanin. (247 aa)
	C3Y659_BRAFL	Tetraspanin. (188 aa)
	C3Y665_BRAFL	Tetraspanin. (223 aa)
	C3Y675_BRAFL	Tetraspanin. (264 aa)
	C3YE68_BRAFL	LRRNT domain-containing protein. (132 aa)
	C3YEZ7_BRAFL	Tetraspanin. (303 aa)
	C3YEZ8_BRAFL	Tetraspanin. (304 aa)
	C3YEZ9_BRAFL	Tetraspanin. (396 aa)
	C3YFG4_BRAFL	Tetraspanin. (327 aa)
	C3YG07_BRAFL	Tetraspanin. (270 aa)
	C3YK57_BRAFL	Tetraspanin. (258 aa)
	C3YL87_BRAFL	Uncharacterized protein. (135 aa)
	C3YUH1_BRAFL	Uncharacterized protein. (399 aa)
	C3YVJ2_BRAFL	Uncharacterized protein. (543 aa)
	C3Z0K2_BRAFL	Uncharacterized protein. (664 aa)
	C3Z5U7_BRAFL	Uncharacterized protein. (648 aa)
	C3ZFA5_BRAFL	Uncharacterized protein. (417 aa)
	C3ZKB5_BRAFL	Uncharacterized protein; Belongs to the CD36 family. (229 aa)
	C3ZKB6_BRAFL	Uncharacterized protein; Belongs to the CD36 family. (159 aa)
	C3ZT79_BRAFL	Tetraspanin. (251 aa)
	C4A0V1_BRAFL	Uncharacterized protein. (93 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQF1_BRAFL	C3YFG4_BRAFL	C3XQF1	C3YFG4	Tetraspanin.	Tetraspanin.	0.555
C3XZ74_BRAFL	C3ZFA5_BRAFL	C3XZ74	C3ZFA5	Uncharacterized protein.	Uncharacterized protein.	0.429
C3Y3C1_BRAFL	C3YEZ7_BRAFL	C3Y3C1	C3YEZ7	Uncharacterized protein; Belongs to the CD36 family.	Tetraspanin.	0.911
C3Y3C1_BRAFL	C3ZKB5_BRAFL	C3Y3C1	C3ZKB5	Uncharacterized protein; Belongs to the CD36 family.	Uncharacterized protein; Belongs to the CD36 family.	0.906
C3Y3C1_BRAFL	C3ZT79_BRAFL	C3Y3C1	C3ZT79	Uncharacterized protein; Belongs to the CD36 family.	Tetraspanin.	0.911
C3Y5Y6_BRAFL	C3Y5Z1_BRAFL	C3Y5Y6	C3Y5Z1	Tetraspanin.	Tetraspanin.	0.541
C3Y5Y6_BRAFL	C3Y675_BRAFL	C3Y5Y6	C3Y675	Tetraspanin.	Tetraspanin.	0.541
C3Y5Y6_BRAFL	C3ZT79_BRAFL	C3Y5Y6	C3ZT79	Tetraspanin.	Tetraspanin.	0.436
C3Y5Z1_BRAFL	C3Y5Y6_BRAFL	C3Y5Z1	C3Y5Y6	Tetraspanin.	Tetraspanin.	0.541
C3Y5Z2_BRAFL	C3ZFA5_BRAFL	C3Y5Z2	C3ZFA5	Tetraspanin.	Uncharacterized protein.	0.436
C3Y653_BRAFL	C3YEZ9_BRAFL	C3Y653	C3YEZ9	Tetraspanin.	Tetraspanin.	0.431
C3Y657_BRAFL	C3YEZ8_BRAFL	C3Y657	C3YEZ8	Tetraspanin.	Tetraspanin.	0.460
C3Y657_BRAFL	C3YEZ9_BRAFL	C3Y657	C3YEZ9	Tetraspanin.	Tetraspanin.	0.419
C3Y659_BRAFL	C3YEZ9_BRAFL	C3Y659	C3YEZ9	Tetraspanin.	Tetraspanin.	0.411
C3Y675_BRAFL	C3Y5Y6_BRAFL	C3Y675	C3Y5Y6	Tetraspanin.	Tetraspanin.	0.541
C3Y675_BRAFL	C3YFG4_BRAFL	C3Y675	C3YFG4	Tetraspanin.	Tetraspanin.	0.428
C3YEZ7_BRAFL	C3Y3C1_BRAFL	C3YEZ7	C3Y3C1	Tetraspanin.	Uncharacterized protein; Belongs to the CD36 family.	0.911
C3YEZ7_BRAFL	C3ZKB5_BRAFL	C3YEZ7	C3ZKB5	Tetraspanin.	Uncharacterized protein; Belongs to the CD36 family.	0.911
C3YEZ7_BRAFL	C3ZT79_BRAFL	C3YEZ7	C3ZT79	Tetraspanin.	Tetraspanin.	0.904
C3YEZ8_BRAFL	C3Y657_BRAFL	C3YEZ8	C3Y657	Tetraspanin.	Tetraspanin.	0.460