(10 nodes) Fucose metabolism, and UDP-xylosyltransferase activity network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XYK7_BRAFL	Uncharacterized protein. (455 aa)
	C3Y110_BRAFL	Uncharacterized protein. (397 aa)
	C3Y161_BRAFL	Uncharacterized protein. (391 aa)
	C3Y1L7_BRAFL	Uncharacterized protein. (417 aa)
	C3YAY6_BRAFL	Uncharacterized protein. (183 aa)
	C3YAY7_BRAFL	Uncharacterized protein. (131 aa)
	C3YUG6_BRAFL	CAP10 domain-containing protein. (351 aa)
	C3YUI0_BRAFL	CAP10 domain-containing protein. (351 aa)
	C3YVI7_BRAFL	Uncharacterized protein. (309 aa)
	C3YVI9_BRAFL	Uncharacterized protein. (499 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XYK7_BRAFL	C3YAY6_BRAFL	C3XYK7	C3YAY6	Uncharacterized protein.	Uncharacterized protein.	0.451
C3XYK7_BRAFL	C3YAY7_BRAFL	C3XYK7	C3YAY7	Uncharacterized protein.	Uncharacterized protein.	0.451
C3Y110_BRAFL	C3Y161_BRAFL	C3Y110	C3Y161	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y110_BRAFL	C3Y1L7_BRAFL	C3Y110	C3Y1L7	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y161_BRAFL	C3Y110_BRAFL	C3Y161	C3Y110	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y161_BRAFL	C3Y1L7_BRAFL	C3Y161	C3Y1L7	Uncharacterized protein.	Uncharacterized protein.	0.904
C3Y1L7_BRAFL	C3Y110_BRAFL	C3Y1L7	C3Y110	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y1L7_BRAFL	C3Y161_BRAFL	C3Y1L7	C3Y161	Uncharacterized protein.	Uncharacterized protein.	0.904
C3YAY6_BRAFL	C3XYK7_BRAFL	C3YAY6	C3XYK7	Uncharacterized protein.	Uncharacterized protein.	0.451
C3YAY6_BRAFL	C3YUG6_BRAFL	C3YAY6	C3YUG6	Uncharacterized protein.	CAP10 domain-containing protein.	0.442
C3YAY6_BRAFL	C3YUI0_BRAFL	C3YAY6	C3YUI0	Uncharacterized protein.	CAP10 domain-containing protein.	0.442
C3YAY7_BRAFL	C3XYK7_BRAFL	C3YAY7	C3XYK7	Uncharacterized protein.	Uncharacterized protein.	0.451
C3YUG6_BRAFL	C3YAY6_BRAFL	C3YUG6	C3YAY6	CAP10 domain-containing protein.	Uncharacterized protein.	0.442
C3YUI0_BRAFL	C3YAY6_BRAFL	C3YUI0	C3YAY6	CAP10 domain-containing protein.	Uncharacterized protein.	0.442