(5 nodes) BBSome network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XU54_BRAFL	Bardet-Biedl syndrome 2 protein homolog. (716 aa)
	C3XXL3_BRAFL	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (715 aa)
	C3YE92_BRAFL	Uncharacterized protein. (702 aa)
	C3Z2B9_BRAFL	BBS1 domain-containing protein. (540 aa)
	C3ZKQ7_BRAFL	TPR_REGION domain-containing protein. (506 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XU54_BRAFL	C3XXL3_BRAFL	C3XU54	C3XXL3	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.995
C3XU54_BRAFL	C3YE92_BRAFL	C3XU54	C3YE92	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.994
C3XU54_BRAFL	C3Z2B9_BRAFL	C3XU54	C3Z2B9	Bardet-Biedl syndrome 2 protein homolog.	BBS1 domain-containing protein.	0.995
C3XU54_BRAFL	C3ZKQ7_BRAFL	C3XU54	C3ZKQ7	Bardet-Biedl syndrome 2 protein homolog.	TPR_REGION domain-containing protein.	0.995
C3XXL3_BRAFL	C3XU54_BRAFL	C3XXL3	C3XU54	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Bardet-Biedl syndrome 2 protein homolog.	0.995
C3XXL3_BRAFL	C3YE92_BRAFL	C3XXL3	C3YE92	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Uncharacterized protein.	0.993
C3XXL3_BRAFL	C3Z2B9_BRAFL	C3XXL3	C3Z2B9	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	BBS1 domain-containing protein.	0.994
C3XXL3_BRAFL	C3ZKQ7_BRAFL	C3XXL3	C3ZKQ7	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	TPR_REGION domain-containing protein.	0.995
C3YE92_BRAFL	C3XU54_BRAFL	C3YE92	C3XU54	Uncharacterized protein.	Bardet-Biedl syndrome 2 protein homolog.	0.994
C3YE92_BRAFL	C3XXL3_BRAFL	C3YE92	C3XXL3	Uncharacterized protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.993
C3YE92_BRAFL	C3Z2B9_BRAFL	C3YE92	C3Z2B9	Uncharacterized protein.	BBS1 domain-containing protein.	0.997
C3YE92_BRAFL	C3ZKQ7_BRAFL	C3YE92	C3ZKQ7	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.994
C3Z2B9_BRAFL	C3XU54_BRAFL	C3Z2B9	C3XU54	BBS1 domain-containing protein.	Bardet-Biedl syndrome 2 protein homolog.	0.995
C3Z2B9_BRAFL	C3XXL3_BRAFL	C3Z2B9	C3XXL3	BBS1 domain-containing protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.994
C3Z2B9_BRAFL	C3YE92_BRAFL	C3Z2B9	C3YE92	BBS1 domain-containing protein.	Uncharacterized protein.	0.997
C3Z2B9_BRAFL	C3ZKQ7_BRAFL	C3Z2B9	C3ZKQ7	BBS1 domain-containing protein.	TPR_REGION domain-containing protein.	0.996
C3ZKQ7_BRAFL	C3XU54_BRAFL	C3ZKQ7	C3XU54	TPR_REGION domain-containing protein.	Bardet-Biedl syndrome 2 protein homolog.	0.995
C3ZKQ7_BRAFL	C3XXL3_BRAFL	C3ZKQ7	C3XXL3	TPR_REGION domain-containing protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.995
C3ZKQ7_BRAFL	C3YE92_BRAFL	C3ZKQ7	C3YE92	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.994
C3ZKQ7_BRAFL	C3Z2B9_BRAFL	C3ZKQ7	C3Z2B9	TPR_REGION domain-containing protein.	BBS1 domain-containing protein.	0.996