23 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQZ7_BRAFL	VEFS-Box domain-containing protein. (581 aa)
	C3XYN9_BRAFL	Uncharacterized protein. (1020 aa)
	C3XZF2_BRAFL	Uncharacterized protein. (329 aa)
	C3Y4M5_BRAFL	SET domain-containing protein. (363 aa)
	C3YBD9_BRAFL	CXXC-type domain-containing protein. (827 aa)
	C3YCV4_BRAFL	CXC domain-containing protein. (625 aa)
	C3YCV5_BRAFL	SET domain-containing protein. (85 aa)
	C3YJ50_BRAFL	Uncharacterized protein. (628 aa)
	C3YNI4_BRAFL	RanBP2-type domain-containing protein. (73 aa)
	C3YW14_BRAFL	RING-type domain-containing protein. (280 aa)
	C3YXD4_BRAFL	Uncharacterized protein. (439 aa)
	C3YZA3_BRAFL	FCS-type domain-containing protein. (543 aa)
	C3Z6P7_BRAFL	Chromo domain-containing protein. (431 aa)
	C3Z6P8_BRAFL	Chromo domain-containing protein. (369 aa)
	C3Z6P9_BRAFL	Chromo domain-containing protein. (389 aa)
	C3ZPC6_BRAFL	RING-type domain-containing protein. (350 aa)
	C3ZTD4_BRAFL	RING-type domain-containing protein. (256 aa)
	C3ZTG5_BRAFL	PHD-type domain-containing protein. (427 aa)
	C3ZTG7_BRAFL	Mtf2_C domain-containing protein. (391 aa)
	C3ZYE0_BRAFL	Uncharacterized protein. (1256 aa)
	C3ZYZ0_BRAFL	SAM domain-containing protein. (51 aa)
	C3ZZ10_BRAFL	Uncharacterized protein. (216 aa)
	C4A021_BRAFL	WD_REPEATS_REGION domain-containing protein. (429 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQZ7_BRAFL	C3XYN9_BRAFL	C3XQZ7	C3XYN9	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.683
C3XQZ7_BRAFL	C3XZF2_BRAFL	C3XQZ7	C3XZF2	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.813
C3XQZ7_BRAFL	C3Y4M5_BRAFL	C3XQZ7	C3Y4M5	VEFS-Box domain-containing protein.	SET domain-containing protein.	0.957
C3XQZ7_BRAFL	C3YCV4_BRAFL	C3XQZ7	C3YCV4	VEFS-Box domain-containing protein.	CXC domain-containing protein.	0.999
C3XQZ7_BRAFL	C3YCV5_BRAFL	C3XQZ7	C3YCV5	VEFS-Box domain-containing protein.	SET domain-containing protein.	0.986
C3XQZ7_BRAFL	C3YJ50_BRAFL	C3XQZ7	C3YJ50	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.781
C3XQZ7_BRAFL	C3YW14_BRAFL	C3XQZ7	C3YW14	VEFS-Box domain-containing protein.	RING-type domain-containing protein.	0.910
C3XQZ7_BRAFL	C3YXD4_BRAFL	C3XQZ7	C3YXD4	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.999
C3XQZ7_BRAFL	C3YZA3_BRAFL	C3XQZ7	C3YZA3	VEFS-Box domain-containing protein.	FCS-type domain-containing protein.	0.725
C3XQZ7_BRAFL	C3Z6P7_BRAFL	C3XQZ7	C3Z6P7	VEFS-Box domain-containing protein.	Chromo domain-containing protein.	0.805
C3XQZ7_BRAFL	C3Z6P8_BRAFL	C3XQZ7	C3Z6P8	VEFS-Box domain-containing protein.	Chromo domain-containing protein.	0.805
C3XQZ7_BRAFL	C3Z6P9_BRAFL	C3XQZ7	C3Z6P9	VEFS-Box domain-containing protein.	Chromo domain-containing protein.	0.805
C3XQZ7_BRAFL	C3ZPC6_BRAFL	C3XQZ7	C3ZPC6	VEFS-Box domain-containing protein.	RING-type domain-containing protein.	0.939
C3XQZ7_BRAFL	C3ZTD4_BRAFL	C3XQZ7	C3ZTD4	VEFS-Box domain-containing protein.	RING-type domain-containing protein.	0.781
C3XQZ7_BRAFL	C3ZTG5_BRAFL	C3XQZ7	C3ZTG5	VEFS-Box domain-containing protein.	PHD-type domain-containing protein.	0.935
C3XQZ7_BRAFL	C3ZTG7_BRAFL	C3XQZ7	C3ZTG7	VEFS-Box domain-containing protein.	Mtf2_C domain-containing protein.	0.935
C3XQZ7_BRAFL	C3ZYE0_BRAFL	C3XQZ7	C3ZYE0	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.987
C3XQZ7_BRAFL	C3ZYZ0_BRAFL	C3XQZ7	C3ZYZ0	VEFS-Box domain-containing protein.	SAM domain-containing protein.	0.683
C3XQZ7_BRAFL	C3ZZ10_BRAFL	C3XQZ7	C3ZZ10	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.783
C3XQZ7_BRAFL	C4A021_BRAFL	C3XQZ7	C4A021	VEFS-Box domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.986