5 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQZ7_BRAFL	VEFS-Box domain-containing protein. (581 aa)
	C3YCV4_BRAFL	CXC domain-containing protein. (625 aa)
	C3YXD4_BRAFL	Uncharacterized protein. (439 aa)
	C3ZYE0_BRAFL	Uncharacterized protein. (1256 aa)
	C4A021_BRAFL	WD_REPEATS_REGION domain-containing protein. (429 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQZ7_BRAFL	C3YCV4_BRAFL	C3XQZ7	C3YCV4	VEFS-Box domain-containing protein.	CXC domain-containing protein.	0.999
C3XQZ7_BRAFL	C3YXD4_BRAFL	C3XQZ7	C3YXD4	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.999
C3XQZ7_BRAFL	C3ZYE0_BRAFL	C3XQZ7	C3ZYE0	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.987
C3XQZ7_BRAFL	C4A021_BRAFL	C3XQZ7	C4A021	VEFS-Box domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.986
C3YCV4_BRAFL	C3XQZ7_BRAFL	C3YCV4	C3XQZ7	CXC domain-containing protein.	VEFS-Box domain-containing protein.	0.999
C3YCV4_BRAFL	C3YXD4_BRAFL	C3YCV4	C3YXD4	CXC domain-containing protein.	Uncharacterized protein.	0.999
C3YCV4_BRAFL	C3ZYE0_BRAFL	C3YCV4	C3ZYE0	CXC domain-containing protein.	Uncharacterized protein.	0.975
C3YCV4_BRAFL	C4A021_BRAFL	C3YCV4	C4A021	CXC domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.985
C3YXD4_BRAFL	C3XQZ7_BRAFL	C3YXD4	C3XQZ7	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.999
C3YXD4_BRAFL	C3YCV4_BRAFL	C3YXD4	C3YCV4	Uncharacterized protein.	CXC domain-containing protein.	0.999
C3YXD4_BRAFL	C3ZYE0_BRAFL	C3YXD4	C3ZYE0	Uncharacterized protein.	Uncharacterized protein.	0.988
C3YXD4_BRAFL	C4A021_BRAFL	C3YXD4	C4A021	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.986
C3ZYE0_BRAFL	C3XQZ7_BRAFL	C3ZYE0	C3XQZ7	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.987
C3ZYE0_BRAFL	C3YCV4_BRAFL	C3ZYE0	C3YCV4	Uncharacterized protein.	CXC domain-containing protein.	0.975
C3ZYE0_BRAFL	C3YXD4_BRAFL	C3ZYE0	C3YXD4	Uncharacterized protein.	Uncharacterized protein.	0.988
C3ZYE0_BRAFL	C4A021_BRAFL	C3ZYE0	C4A021	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.865
C4A021_BRAFL	C3XQZ7_BRAFL	C4A021	C3XQZ7	WD_REPEATS_REGION domain-containing protein.	VEFS-Box domain-containing protein.	0.986
C4A021_BRAFL	C3YCV4_BRAFL	C4A021	C3YCV4	WD_REPEATS_REGION domain-containing protein.	CXC domain-containing protein.	0.985
C4A021_BRAFL	C3YXD4_BRAFL	C4A021	C3YXD4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.986
C4A021_BRAFL	C3ZYE0_BRAFL	C4A021	C3ZYE0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.865