21 items (Branchiostoma floridae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	C3XX69_BRAFL	Helicase ATP-binding domain-containing protein. (692 aa)
	C3Y0C1_BRAFL	Uncharacterized protein. (320 aa)
	C3Y0H1_BRAFL	Helicase ATP-binding domain-containing protein. (763 aa)
	C3Y0I0_BRAFL	Uncharacterized protein. (311 aa)
	C3Y693_BRAFL	Uncharacterized protein. (551 aa)
	C3YBM6_BRAFL	Uncharacterized protein. (138 aa)
	C3YBM8_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (218 aa)
	C3YBY7_BRAFL	Uncharacterized protein. (798 aa)
	C3YD69_BRAFL	Uncharacterized protein. (573 aa)
	C3YK92_BRAFL	Uncharacterized protein. (100 aa)
	C3YN18_BRAFL	General transcription factor IIH subunit. (396 aa)
	C3YQI6_BRAFL	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (534 aa)
	C3YTK8_BRAFL	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
	C3YVD4_BRAFL	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa)
	C3Z2E0_BRAFL	HTH TFE/IIEalpha-type domain-containing protein. (429 aa)
	C3Z5Q6_BRAFL	Uncharacterized protein. (71 aa)
	C3Z898_BRAFL	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
	C3ZCP1_BRAFL	TFIIB-type domain-containing protein. (319 aa)
	C3ZCV2_BRAFL	Uncharacterized protein. (205 aa)
	C3ZT09_BRAFL	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
	C4A0W1_BRAFL	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XX69_BRAFL	C3Y0C1_BRAFL	C3XX69	C3Y0C1	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.670
C3XX69_BRAFL	C3Y0I0_BRAFL	C3XX69	C3Y0I0	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.730
C3XX69_BRAFL	C3Y693_BRAFL	C3XX69	C3Y693	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.916
C3XX69_BRAFL	C3YBM6_BRAFL	C3XX69	C3YBM6	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.618
C3XX69_BRAFL	C3YBM8_BRAFL	C3XX69	C3YBM8	Helicase ATP-binding domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.618
C3XX69_BRAFL	C3YBY7_BRAFL	C3XX69	C3YBY7	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.922
C3XX69_BRAFL	C3YD69_BRAFL	C3XX69	C3YD69	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.913
C3XX69_BRAFL	C3YK92_BRAFL	C3XX69	C3YK92	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.618
C3XX69_BRAFL	C3YN18_BRAFL	C3XX69	C3YN18	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit.	0.915
C3XX69_BRAFL	C3YQI6_BRAFL	C3XX69	C3YQI6	Helicase ATP-binding domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.746
C3XX69_BRAFL	C3YTK8_BRAFL	C3XX69	C3YTK8	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.895
C3XX69_BRAFL	C3YVD4_BRAFL	C3XX69	C3YVD4	Helicase ATP-binding domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.872
C3XX69_BRAFL	C3Z2E0_BRAFL	C3XX69	C3Z2E0	Helicase ATP-binding domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.898
C3XX69_BRAFL	C3Z5Q6_BRAFL	C3XX69	C3Z5Q6	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.712
C3XX69_BRAFL	C3Z898_BRAFL	C3XX69	C3Z898	Helicase ATP-binding domain-containing protein.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.743
C3XX69_BRAFL	C3ZCP1_BRAFL	C3XX69	C3ZCP1	Helicase ATP-binding domain-containing protein.	TFIIB-type domain-containing protein.	0.795
C3XX69_BRAFL	C3ZCV2_BRAFL	C3XX69	C3ZCV2	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.670
C3XX69_BRAFL	C3ZT09_BRAFL	C3XX69	C3ZT09	Helicase ATP-binding domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.712
C3XX69_BRAFL	C4A0W1_BRAFL	C3XX69	C4A0W1	Helicase ATP-binding domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.712
C3Y0C1_BRAFL	C3XX69_BRAFL	C3Y0C1	C3XX69	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.670