10 items (Branchiostoma floridae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	C3Y0H1_BRAFL	Helicase ATP-binding domain-containing protein. (763 aa)
	C3Y693_BRAFL	Uncharacterized protein. (551 aa)
	C3YBY7_BRAFL	Uncharacterized protein. (798 aa)
	C3YD69_BRAFL	Uncharacterized protein. (573 aa)
	C3YN18_BRAFL	General transcription factor IIH subunit. (396 aa)
	C3YTK8_BRAFL	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
	C3YVD4_BRAFL	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa)
	C3Z2E0_BRAFL	HTH TFE/IIEalpha-type domain-containing protein. (429 aa)
	C3Z5Q6_BRAFL	Uncharacterized protein. (71 aa)
	C3ZT09_BRAFL	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0H1_BRAFL	C3Y693_BRAFL	C3Y0H1	C3Y693	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.998
C3Y0H1_BRAFL	C3YBY7_BRAFL	C3Y0H1	C3YBY7	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.998
C3Y0H1_BRAFL	C3YD69_BRAFL	C3Y0H1	C3YD69	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.998
C3Y0H1_BRAFL	C3YN18_BRAFL	C3Y0H1	C3YN18	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit.	0.998
C3Y0H1_BRAFL	C3YTK8_BRAFL	C3Y0H1	C3YTK8	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.997
C3Y0H1_BRAFL	C3YVD4_BRAFL	C3Y0H1	C3YVD4	Helicase ATP-binding domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.997
C3Y0H1_BRAFL	C3Z2E0_BRAFL	C3Y0H1	C3Z2E0	Helicase ATP-binding domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.997
C3Y0H1_BRAFL	C3Z5Q6_BRAFL	C3Y0H1	C3Z5Q6	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.952
C3Y0H1_BRAFL	C3ZT09_BRAFL	C3Y0H1	C3ZT09	Helicase ATP-binding domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.971
C3Y693_BRAFL	C3Y0H1_BRAFL	C3Y693	C3Y0H1	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.998
C3Y693_BRAFL	C3YBY7_BRAFL	C3Y693	C3YBY7	Uncharacterized protein.	Uncharacterized protein.	0.999
C3Y693_BRAFL	C3YD69_BRAFL	C3Y693	C3YD69	Uncharacterized protein.	Uncharacterized protein.	0.999
C3Y693_BRAFL	C3YN18_BRAFL	C3Y693	C3YN18	Uncharacterized protein.	General transcription factor IIH subunit.	0.999
C3Y693_BRAFL	C3YTK8_BRAFL	C3Y693	C3YTK8	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
C3Y693_BRAFL	C3YVD4_BRAFL	C3Y693	C3YVD4	Uncharacterized protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.996
C3Y693_BRAFL	C3Z2E0_BRAFL	C3Y693	C3Z2E0	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.998
C3Y693_BRAFL	C3Z5Q6_BRAFL	C3Y693	C3Z5Q6	Uncharacterized protein.	Uncharacterized protein.	0.977
C3Y693_BRAFL	C3ZT09_BRAFL	C3Y693	C3ZT09	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.985
C3YBY7_BRAFL	C3Y0H1_BRAFL	C3YBY7	C3Y0H1	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.998
C3YBY7_BRAFL	C3Y693_BRAFL	C3YBY7	C3Y693	Uncharacterized protein.	Uncharacterized protein.	0.999