5 items (Branchiostoma floridae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	C3Y0C1_BRAFL	Uncharacterized protein. (320 aa)
	C3Y0I0_BRAFL	Uncharacterized protein. (311 aa)
	C3YQI6_BRAFL	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (534 aa)
	C3Z898_BRAFL	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
	C3ZCP1_BRAFL	TFIIB-type domain-containing protein. (319 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0C1_BRAFL	C3Y0I0_BRAFL	C3Y0C1	C3Y0I0	Uncharacterized protein.	Uncharacterized protein.	0.998
C3Y0C1_BRAFL	C3YQI6_BRAFL	C3Y0C1	C3YQI6	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.975
C3Y0C1_BRAFL	C3Z898_BRAFL	C3Y0C1	C3Z898	Uncharacterized protein.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.990
C3Y0C1_BRAFL	C3ZCP1_BRAFL	C3Y0C1	C3ZCP1	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.998
C3Y0I0_BRAFL	C3Y0C1_BRAFL	C3Y0I0	C3Y0C1	Uncharacterized protein.	Uncharacterized protein.	0.998
C3Y0I0_BRAFL	C3YQI6_BRAFL	C3Y0I0	C3YQI6	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.978
C3Y0I0_BRAFL	C3Z898_BRAFL	C3Y0I0	C3Z898	Uncharacterized protein.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.985
C3Y0I0_BRAFL	C3ZCP1_BRAFL	C3Y0I0	C3ZCP1	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.986
C3YQI6_BRAFL	C3Y0C1_BRAFL	C3YQI6	C3Y0C1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.975
C3YQI6_BRAFL	C3Y0I0_BRAFL	C3YQI6	C3Y0I0	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.978
C3YQI6_BRAFL	C3Z898_BRAFL	C3YQI6	C3Z898	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.999
C3YQI6_BRAFL	C3ZCP1_BRAFL	C3YQI6	C3ZCP1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TFIIB-type domain-containing protein.	0.996
C3Z898_BRAFL	C3Y0C1_BRAFL	C3Z898	C3Y0C1	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	Uncharacterized protein.	0.990
C3Z898_BRAFL	C3Y0I0_BRAFL	C3Z898	C3Y0I0	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	Uncharacterized protein.	0.985
C3Z898_BRAFL	C3YQI6_BRAFL	C3Z898	C3YQI6	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.999
C3Z898_BRAFL	C3ZCP1_BRAFL	C3Z898	C3ZCP1	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	TFIIB-type domain-containing protein.	0.998
C3ZCP1_BRAFL	C3Y0C1_BRAFL	C3ZCP1	C3Y0C1	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.998
C3ZCP1_BRAFL	C3Y0I0_BRAFL	C3ZCP1	C3Y0I0	TFIIB-type domain-containing protein.	Uncharacterized protein.	0.986
C3ZCP1_BRAFL	C3YQI6_BRAFL	C3ZCP1	C3YQI6	TFIIB-type domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.996
C3ZCP1_BRAFL	C3Z898_BRAFL	C3ZCP1	C3Z898	TFIIB-type domain-containing protein.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.998