23 items (Branchiostoma floridae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Your Input:
	C3XPX8_BRAFL	RPOL4c domain-containing protein. (142 aa)
	C3XRA2_BRAFL	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
	C3Y529_BRAFL	TPR_REGION domain-containing protein. (1183 aa)
	C3Y5U9_BRAFL	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1104 aa)
	C3YA64_BRAFL	Uncharacterized protein. (352 aa)
	C3YD45_BRAFL	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1823 aa)
	C3YDJ1_BRAFL	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
	C3YDW0_BRAFL	Uncharacterized protein. (951 aa)
	C3YDW7_BRAFL	Uncharacterized protein. (946 aa)
	C3YH75_BRAFL	Uncharacterized protein. (129 aa)
	C3YLD4_BRAFL	Uncharacterized protein. (1003 aa)
	C3YLT3_BRAFL	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (82 aa)
	C3YY41_BRAFL	RNA_pol_L_2 domain-containing protein. (117 aa)
	C3Z3Y2_BRAFL	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (710 aa)
	C3Z6M7_BRAFL	HHH_7 domain-containing protein. (944 aa)
	C3Z918_BRAFL	RPOLD domain-containing protein. (275 aa)
	C3Z9K5_BRAFL	TFIIS N-terminal domain-containing protein. (712 aa)
	C3ZEM7_BRAFL	TFIIS N-terminal domain-containing protein. (295 aa)
	C3ZES3_BRAFL	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1934 aa)
	C3ZG24_BRAFL	Uncharacterized protein. (536 aa)
	C3ZQF0_BRAFL	Uncharacterized protein. (210 aa)
	C3ZQG2_BRAFL	Plus3 domain-containing protein. (605 aa)
	C3ZQZ0_BRAFL	Uncharacterized protein. (172 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPX8_BRAFL	C3XRA2_BRAFL	C3XPX8	C3XRA2	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
C3XPX8_BRAFL	C3Y529_BRAFL	C3XPX8	C3Y529	RPOL4c domain-containing protein.	TPR_REGION domain-containing protein.	0.890
C3XPX8_BRAFL	C3Y5U9_BRAFL	C3XPX8	C3Y5U9	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
C3XPX8_BRAFL	C3YA64_BRAFL	C3XPX8	C3YA64	RPOL4c domain-containing protein.	Uncharacterized protein.	0.887
C3XPX8_BRAFL	C3YD45_BRAFL	C3XPX8	C3YD45	RPOL4c domain-containing protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.938
C3XPX8_BRAFL	C3YDJ1_BRAFL	C3XPX8	C3YDJ1	RPOL4c domain-containing protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.997
C3XPX8_BRAFL	C3YDW0_BRAFL	C3XPX8	C3YDW0	RPOL4c domain-containing protein.	Uncharacterized protein.	0.969
C3XPX8_BRAFL	C3YDW7_BRAFL	C3XPX8	C3YDW7	RPOL4c domain-containing protein.	Uncharacterized protein.	0.969
C3XPX8_BRAFL	C3YH75_BRAFL	C3XPX8	C3YH75	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
C3XPX8_BRAFL	C3YLD4_BRAFL	C3XPX8	C3YLD4	RPOL4c domain-containing protein.	Uncharacterized protein.	0.969
C3XPX8_BRAFL	C3YLT3_BRAFL	C3XPX8	C3YLT3	RPOL4c domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.883
C3XPX8_BRAFL	C3YY41_BRAFL	C3XPX8	C3YY41	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
C3XPX8_BRAFL	C3Z3Y2_BRAFL	C3XPX8	C3Z3Y2	RPOL4c domain-containing protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.966
C3XPX8_BRAFL	C3Z6M7_BRAFL	C3XPX8	C3Z6M7	RPOL4c domain-containing protein.	HHH_7 domain-containing protein.	0.897
C3XPX8_BRAFL	C3Z918_BRAFL	C3XPX8	C3Z918	RPOL4c domain-containing protein.	RPOLD domain-containing protein.	0.999
C3XPX8_BRAFL	C3Z9K5_BRAFL	C3XPX8	C3Z9K5	RPOL4c domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.939
C3XPX8_BRAFL	C3ZEM7_BRAFL	C3XPX8	C3ZEM7	RPOL4c domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.450
C3XPX8_BRAFL	C3ZES3_BRAFL	C3XPX8	C3ZES3	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.986
C3XPX8_BRAFL	C3ZG24_BRAFL	C3XPX8	C3ZG24	RPOL4c domain-containing protein.	Uncharacterized protein.	0.890
C3XPX8_BRAFL	C3ZQF0_BRAFL	C3XPX8	C3ZQF0	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999