(15 nodes) Glycosphingolipid biosynthesis - ganglio series network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XSD5_BRAFL	Glyco_trans_2-like domain-containing protein. (363 aa)
	C3XTY4_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (190 aa)
	C3Y326_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (234 aa)
	C3YDB4_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (407 aa)
	C3YGC3_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (355 aa)
	C3YIZ3_BRAFL	Glyco_trans_2-like domain-containing protein. (387 aa)
	C3YW76_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (241 aa)
	C3YXS1_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (426 aa)
	C3YYC5_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (230 aa)
	C3Z9Y3_BRAFL	Glyco_trans_2-like domain-containing protein. (349 aa)
	C3ZDT8_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (297 aa)
	C3ZEG5_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (273 aa)
	C3ZKM5_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (435 aa)
	C3ZLN8_BRAFL	Uncharacterized protein. (492 aa)
	C3ZS52_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (295 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSD5_BRAFL	C3XTY4_BRAFL	C3XSD5	C3XTY4	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3YDB4_BRAFL	C3XSD5	C3YDB4	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3YW76_BRAFL	C3XSD5	C3YW76	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3YXS1_BRAFL	C3XSD5	C3YXS1	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3YYC5_BRAFL	C3XSD5	C3YYC5	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3ZDT8_BRAFL	C3XSD5	C3ZDT8	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3ZEG5_BRAFL	C3XSD5	C3ZEG5	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3ZKM5_BRAFL	C3XSD5	C3ZKM5	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XSD5_BRAFL	C3ZLN8_BRAFL	C3XSD5	C3ZLN8	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein.	0.900
C3XSD5_BRAFL	C3ZS52_BRAFL	C3XSD5	C3ZS52	Glyco_trans_2-like domain-containing protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.650
C3XTY4_BRAFL	C3XSD5_BRAFL	C3XTY4	C3XSD5	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Glyco_trans_2-like domain-containing protein.	0.650
C3XTY4_BRAFL	C3Y326_BRAFL	C3XTY4	C3Y326	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.514
C3XTY4_BRAFL	C3YDB4_BRAFL	C3XTY4	C3YDB4	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.668
C3XTY4_BRAFL	C3YGC3_BRAFL	C3XTY4	C3YGC3	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.914
C3XTY4_BRAFL	C3YIZ3_BRAFL	C3XTY4	C3YIZ3	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Glyco_trans_2-like domain-containing protein.	0.650
C3XTY4_BRAFL	C3YW76_BRAFL	C3XTY4	C3YW76	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.670
C3XTY4_BRAFL	C3YXS1_BRAFL	C3XTY4	C3YXS1	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.677
C3XTY4_BRAFL	C3YYC5_BRAFL	C3XTY4	C3YYC5	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.673
C3XTY4_BRAFL	C3Z9Y3_BRAFL	C3XTY4	C3Z9Y3	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Glyco_trans_2-like domain-containing protein.	0.650
C3XTY4_BRAFL	C3ZDT8_BRAFL	C3XTY4	C3ZDT8	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.685