12 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XRR2_BRAFL	Uncharacterized protein. (186 aa)
	C3YBZ3_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (371 aa)
	C3YKZ5_BRAFL	Hexosyltransferase. (267 aa)
	C3YQJ1_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (480 aa)
	C3YQK9_BRAFL	Hexosyltransferase. (415 aa)
	C3Z047_BRAFL	Uncharacterized protein. (590 aa)
	C3Z7X8_BRAFL	Uncharacterized protein. (283 aa)
	C3Z7Y0_BRAFL	Uncharacterized protein. (215 aa)
	C3ZDY3_BRAFL	Hexosyltransferase. (339 aa)
	C3ZDY4_BRAFL	Hexosyltransferase. (270 aa)
	C3ZJB8_BRAFL	Hexosyltransferase. (226 aa)
	C3ZTD7_BRAFL	Uncharacterized protein. (352 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRR2_BRAFL	C3YBZ3_BRAFL	C3XRR2	C3YBZ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
C3XRR2_BRAFL	C3YKZ5_BRAFL	C3XRR2	C3YKZ5	Uncharacterized protein.	Hexosyltransferase.	0.694
C3XRR2_BRAFL	C3YQJ1_BRAFL	C3XRR2	C3YQJ1	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
C3XRR2_BRAFL	C3YQK9_BRAFL	C3XRR2	C3YQK9	Uncharacterized protein.	Hexosyltransferase.	0.907
C3XRR2_BRAFL	C3Z047_BRAFL	C3XRR2	C3Z047	Uncharacterized protein.	Uncharacterized protein.	0.681
C3XRR2_BRAFL	C3ZDY3_BRAFL	C3XRR2	C3ZDY3	Uncharacterized protein.	Hexosyltransferase.	0.681
C3XRR2_BRAFL	C3ZDY4_BRAFL	C3XRR2	C3ZDY4	Uncharacterized protein.	Hexosyltransferase.	0.681
C3XRR2_BRAFL	C3ZJB8_BRAFL	C3XRR2	C3ZJB8	Uncharacterized protein.	Hexosyltransferase.	0.905
C3YBZ3_BRAFL	C3XRR2_BRAFL	C3YBZ3	C3XRR2	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3YKZ5_BRAFL	C3YBZ3	C3YKZ5	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Hexosyltransferase.	0.682
C3YBZ3_BRAFL	C3YQJ1_BRAFL	C3YBZ3	C3YQJ1	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.910
C3YBZ3_BRAFL	C3Z047_BRAFL	C3YBZ3	C3Z047	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.657
C3YBZ3_BRAFL	C3Z7X8_BRAFL	C3YBZ3	C3Z7X8	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3Z7Y0_BRAFL	C3YBZ3	C3Z7Y0	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.911
C3YBZ3_BRAFL	C3ZDY3_BRAFL	C3YBZ3	C3ZDY3	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Hexosyltransferase.	0.657
C3YBZ3_BRAFL	C3ZDY4_BRAFL	C3YBZ3	C3ZDY4	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Hexosyltransferase.	0.657
C3YBZ3_BRAFL	C3ZTD7_BRAFL	C3YBZ3	C3ZTD7	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.900
C3YKZ5_BRAFL	C3XRR2_BRAFL	C3YKZ5	C3XRR2	Hexosyltransferase.	Uncharacterized protein.	0.694
C3YKZ5_BRAFL	C3YBZ3_BRAFL	C3YKZ5	C3YBZ3	Hexosyltransferase.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.682
C3YKZ5_BRAFL	C3YQJ1_BRAFL	C3YKZ5	C3YQJ1	Hexosyltransferase.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.682