6 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y529_BRAFL	TPR_REGION domain-containing protein. (1183 aa)
	C3YA64_BRAFL	Uncharacterized protein. (352 aa)
	C3YLD4_BRAFL	Uncharacterized protein. (1003 aa)
	C3Z3Y2_BRAFL	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (710 aa)
	C3ZG24_BRAFL	Uncharacterized protein. (536 aa)
	C3ZQG2_BRAFL	Plus3 domain-containing protein. (605 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y529_BRAFL	C3YA64_BRAFL	C3Y529	C3YA64	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
C3Y529_BRAFL	C3YLD4_BRAFL	C3Y529	C3YLD4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.995
C3Y529_BRAFL	C3Z3Y2_BRAFL	C3Y529	C3Z3Y2	TPR_REGION domain-containing protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.999
C3Y529_BRAFL	C3ZG24_BRAFL	C3Y529	C3ZG24	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
C3Y529_BRAFL	C3ZQG2_BRAFL	C3Y529	C3ZQG2	TPR_REGION domain-containing protein.	Plus3 domain-containing protein.	0.999
C3YA64_BRAFL	C3Y529_BRAFL	C3YA64	C3Y529	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
C3YA64_BRAFL	C3YLD4_BRAFL	C3YA64	C3YLD4	Uncharacterized protein.	Uncharacterized protein.	0.991
C3YA64_BRAFL	C3Z3Y2_BRAFL	C3YA64	C3Z3Y2	Uncharacterized protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.998
C3YA64_BRAFL	C3ZG24_BRAFL	C3YA64	C3ZG24	Uncharacterized protein.	Uncharacterized protein.	0.999
C3YA64_BRAFL	C3ZQG2_BRAFL	C3YA64	C3ZQG2	Uncharacterized protein.	Plus3 domain-containing protein.	0.998
C3YLD4_BRAFL	C3Y529_BRAFL	C3YLD4	C3Y529	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.995
C3YLD4_BRAFL	C3YA64_BRAFL	C3YLD4	C3YA64	Uncharacterized protein.	Uncharacterized protein.	0.991
C3YLD4_BRAFL	C3Z3Y2_BRAFL	C3YLD4	C3Z3Y2	Uncharacterized protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.999
C3YLD4_BRAFL	C3ZG24_BRAFL	C3YLD4	C3ZG24	Uncharacterized protein.	Uncharacterized protein.	0.998
C3YLD4_BRAFL	C3ZQG2_BRAFL	C3YLD4	C3ZQG2	Uncharacterized protein.	Plus3 domain-containing protein.	0.982
C3Z3Y2_BRAFL	C3Y529_BRAFL	C3Z3Y2	C3Y529	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	TPR_REGION domain-containing protein.	0.999
C3Z3Y2_BRAFL	C3YA64_BRAFL	C3Z3Y2	C3YA64	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Uncharacterized protein.	0.998
C3Z3Y2_BRAFL	C3YLD4_BRAFL	C3Z3Y2	C3YLD4	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Uncharacterized protein.	0.999
C3Z3Y2_BRAFL	C3ZG24_BRAFL	C3Z3Y2	C3ZG24	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Uncharacterized protein.	0.998
C3Z3Y2_BRAFL	C3ZQG2_BRAFL	C3Z3Y2	C3ZQG2	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Plus3 domain-containing protein.	0.997