STRINGSTRING
C3XR64_BRAFL C3XR64_BRAFL C3YNN4_BRAFL C3YNN4_BRAFL C3YYB0_BRAFL C3YYB0_BRAFL C3ZIZ8_BRAFL C3ZIZ8_BRAFL C3ZN20_BRAFL C3ZN20_BRAFL C3ZNH0_BRAFL C3ZNH0_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XR64_BRAFLPolypeptide N-acetylgalactosaminyltransferase. (539 aa)
C3YNN4_BRAFLPolypeptide N-acetylgalactosaminyltransferase. (301 aa)
C3YYB0_BRAFLUncharacterized protein. (119 aa)
C3ZIZ8_BRAFLPolypeptide N-acetylgalactosaminyltransferase. (618 aa)
C3ZN20_BRAFLPolypeptide N-acetylgalactosaminyltransferase. (522 aa)
C3ZNH0_BRAFLGlyco_trans_2-like domain-containing protein. (292 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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