(21 nodes) Apoptotic factor-mediated response, and BIR repeat network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPS9_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (309 aa)
	C3Y0Z2_BRAFL	Uncharacterized protein. (386 aa)
	C3Y396_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (242 aa)
	C3Y5Y4_BRAFL	Uncharacterized protein. (2080 aa)
	C3Y726_BRAFL	Uncharacterized protein. (215 aa)
	C3YAZ4_BRAFL	CARD domain-containing protein. (324 aa)
	C3YEP8_BRAFL	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	C3YQ93_BRAFL	Uncharacterized protein. (1793 aa)
	C3YUF2_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (224 aa)
	C3YZ38_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (809 aa)
	C3YZV6_BRAFL	Uncharacterized protein. (1238 aa)
	C3Z391_BRAFL	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (111 aa)
	C3Z5V3_BRAFL	RING-type domain-containing protein. (376 aa)
	C3Z5V4_BRAFL	RING-type domain-containing protein. (371 aa)
	C3ZAU7_BRAFL	WD_REPEATS_REGION domain-containing protein. (1691 aa)
	C3ZDH2_BRAFL	RING-type domain-containing protein. (426 aa)
	C3ZQ20_BRAFL	Uncharacterized protein. (62 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZXH5_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (439 aa)
	C3ZY21_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (246 aa)
	C3ZY28_BRAFL	CARD domain-containing protein. (105 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPS9_BRAFL	C3Y5Y4_BRAFL	C3XPS9	C3Y5Y4	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.535
C3XPS9_BRAFL	C3YQ93_BRAFL	C3XPS9	C3YQ93	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.535
C3XPS9_BRAFL	C3YZV6_BRAFL	C3XPS9	C3YZV6	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.585
C3XPS9_BRAFL	C3ZAU7_BRAFL	C3XPS9	C3ZAU7	Uncharacterized protein; Belongs to the peptidase C14A family.	WD_REPEATS_REGION domain-containing protein.	0.535
C3Y0Z2_BRAFL	C3Y5Y4_BRAFL	C3Y0Z2	C3Y5Y4	Uncharacterized protein.	Uncharacterized protein.	0.959
C3Y0Z2_BRAFL	C3YQ93_BRAFL	C3Y0Z2	C3YQ93	Uncharacterized protein.	Uncharacterized protein.	0.959
C3Y0Z2_BRAFL	C3YZV6_BRAFL	C3Y0Z2	C3YZV6	Uncharacterized protein.	Uncharacterized protein.	0.976
C3Y0Z2_BRAFL	C3ZAU7_BRAFL	C3Y0Z2	C3ZAU7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.959
C3Y396_BRAFL	C3Y5Y4_BRAFL	C3Y396	C3Y5Y4	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.535
C3Y396_BRAFL	C3Y726_BRAFL	C3Y396	C3Y726	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.486
C3Y396_BRAFL	C3YEP8_BRAFL	C3Y396	C3YEP8	Uncharacterized protein; Belongs to the peptidase C14A family.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.639
C3Y396_BRAFL	C3YQ93_BRAFL	C3Y396	C3YQ93	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.535
C3Y396_BRAFL	C3YUF2_BRAFL	C3Y396	C3YUF2	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.426
C3Y396_BRAFL	C3YZV6_BRAFL	C3Y396	C3YZV6	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.898
C3Y396_BRAFL	C3Z391_BRAFL	C3Y396	C3Z391	Uncharacterized protein; Belongs to the peptidase C14A family.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.639
C3Y396_BRAFL	C3Z5V3_BRAFL	C3Y396	C3Z5V3	Uncharacterized protein; Belongs to the peptidase C14A family.	RING-type domain-containing protein.	0.425
C3Y396_BRAFL	C3Z5V4_BRAFL	C3Y396	C3Z5V4	Uncharacterized protein; Belongs to the peptidase C14A family.	RING-type domain-containing protein.	0.425
C3Y396_BRAFL	C3ZAU7_BRAFL	C3Y396	C3ZAU7	Uncharacterized protein; Belongs to the peptidase C14A family.	WD_REPEATS_REGION domain-containing protein.	0.535
C3Y396_BRAFL	C3ZDH2_BRAFL	C3Y396	C3ZDH2	Uncharacterized protein; Belongs to the peptidase C14A family.	RING-type domain-containing protein.	0.425
C3Y396_BRAFL	C3ZQ20_BRAFL	C3Y396	C3ZQ20	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.425