(19 nodes) DnaJ domain, conserved site, and MreB/Mbl protein network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQN6_BRAFL	Uncharacterized protein. (516 aa)
	C3XS36_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (638 aa)
	C3YFB6_BRAFL	Uncharacterized protein. (412 aa)
	C3YJC3_BRAFL	J domain-containing protein. (204 aa)
	C3YL39_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (660 aa)
	C3YM30_BRAFL	Uncharacterized protein. (321 aa)
	C3YMM0_BRAFL	Uncharacterized protein. (381 aa)
	C3YQT1_BRAFL	J domain-containing protein. (348 aa)
	C3YRQ7_BRAFL	Uncharacterized protein. (240 aa)
	C3Z8N6_BRAFL	J domain-containing protein. (218 aa)
	C3ZBK8_BRAFL	DUF775 domain-containing protein. (196 aa)
	C3ZBQ1_BRAFL	HSF_DOMAIN domain-containing protein. (118 aa)
	C3ZJG7_BRAFL	Uncharacterized protein. (402 aa)
	C3ZLA5_BRAFL	J domain-containing protein. (316 aa)
	C3ZQ99_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (773 aa)
	C3ZZW9_BRAFL	Uncharacterized protein. (738 aa)
	C4A043_BRAFL	J domain-containing protein. (384 aa)
	C4A0A7_BRAFL	Uncharacterized protein. (177 aa)
	C4A0Y9_BRAFL	Uncharacterized protein. (385 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQN6_BRAFL	C3XS36_BRAFL	C3XQN6	C3XS36	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.932
C3XQN6_BRAFL	C3YFB6_BRAFL	C3XQN6	C3YFB6	Uncharacterized protein.	Uncharacterized protein.	0.504
C3XQN6_BRAFL	C3YL39_BRAFL	C3XQN6	C3YL39	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.932
C3XQN6_BRAFL	C3YM30_BRAFL	C3XQN6	C3YM30	Uncharacterized protein.	Uncharacterized protein.	0.932
C3XQN6_BRAFL	C3YRQ7_BRAFL	C3XQN6	C3YRQ7	Uncharacterized protein.	Uncharacterized protein.	0.511
C3XQN6_BRAFL	C3ZJG7_BRAFL	C3XQN6	C3ZJG7	Uncharacterized protein.	Uncharacterized protein.	0.486
C3XQN6_BRAFL	C3ZQ99_BRAFL	C3XQN6	C3ZQ99	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.781
C3XQN6_BRAFL	C3ZZW9_BRAFL	C3XQN6	C3ZZW9	Uncharacterized protein.	Uncharacterized protein.	0.742
C3XQN6_BRAFL	C4A0Y9_BRAFL	C3XQN6	C4A0Y9	Uncharacterized protein.	Uncharacterized protein.	0.742
C3XS36_BRAFL	C3XQN6_BRAFL	C3XS36	C3XQN6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.932
C3XS36_BRAFL	C3YFB6_BRAFL	C3XS36	C3YFB6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.882
C3XS36_BRAFL	C3YJC3_BRAFL	C3XS36	C3YJC3	Uncharacterized protein; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.850
C3XS36_BRAFL	C3YL39_BRAFL	C3XS36	C3YL39	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.901
C3XS36_BRAFL	C3YMM0_BRAFL	C3XS36	C3YMM0	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.690
C3XS36_BRAFL	C3YQT1_BRAFL	C3XS36	C3YQT1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.834
C3XS36_BRAFL	C3YRQ7_BRAFL	C3XS36	C3YRQ7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.912
C3XS36_BRAFL	C3Z8N6_BRAFL	C3XS36	C3Z8N6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.792
C3XS36_BRAFL	C3ZBK8_BRAFL	C3XS36	C3ZBK8	Uncharacterized protein; Belongs to the heat shock protein 70 family.	DUF775 domain-containing protein.	0.562
C3XS36_BRAFL	C3ZBQ1_BRAFL	C3XS36	C3ZBQ1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	HSF_DOMAIN domain-containing protein.	0.868
C3XS36_BRAFL	C3ZJG7_BRAFL	C3XS36	C3ZJG7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.883