(31 nodes) Mixed, incl. HECT domain, and Vacuolar-sorting-associated 13 protein C-terminal network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XTK1_BRAFL	Uncharacterized protein. (331 aa)
	C3XU82_BRAFL	C2H2-type domain-containing protein. (171 aa)
	C3XUA9_BRAFL	Protein kinase domain-containing protein. (354 aa)
	C3XVW7_BRAFL	Uncharacterized protein. (148 aa)
	C3XW52_BRAFL	Uncharacterized protein. (734 aa)
	C3XXM8_BRAFL	Uncharacterized protein. (752 aa)
	C3Y9L4_BRAFL	Uncharacterized protein. (2990 aa)
	C3YCK6_BRAFL	HECT domain-containing protein. (1069 aa)
	C3YCK7_BRAFL	HECT domain-containing protein. (344 aa)
	C3YKE2_BRAFL	Uncharacterized protein. (3136 aa)
	C3YLJ2_BRAFL	HECT domain-containing protein. (1535 aa)
	C3YLJ3_BRAFL	Uncharacterized protein. (1297 aa)
	C3YW12_BRAFL	GIY-YIG domain-containing protein. (600 aa)
	C3YY01_BRAFL	HECT domain-containing protein. (126 aa)
	C3YY09_BRAFL	Uncharacterized protein. (939 aa)
	C3Z0Q1_BRAFL	Uncharacterized protein. (2263 aa)
	C3Z2W5_BRAFL	THUMP domain-containing protein. (555 aa)
	C3Z379_BRAFL	Ion_trans_2 domain-containing protein. (107 aa)
	C3Z3T6_BRAFL	UBR-type domain-containing protein. (415 aa)
	C3Z4V7_BRAFL	Uncharacterized protein. (674 aa)
	C3ZB62_BRAFL	B box-type domain-containing protein. (603 aa)
	C3ZHL9_BRAFL	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (372 aa)
	C3ZHM0_BRAFL	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (487 aa)
	C3ZHY2_BRAFL	UBR-type domain-containing protein. (4564 aa)
	C3ZKQ3_BRAFL	USP domain-containing protein; Belongs to the peptidase C19 family. (3746 aa)
	C3ZLZ8_BRAFL	CRAL-TRIO domain-containing protein. (235 aa)
	C3ZQS8_BRAFL	Uncharacterized protein. (4293 aa)
	C3ZS25_BRAFL	Uncharacterized protein. (2721 aa)
	C3ZTV9_BRAFL	CRAL-TRIO domain-containing protein. (294 aa)
	C3ZVS4_BRAFL	Uncharacterized protein. (474 aa)
	C3ZWH0_BRAFL	RING-type domain-containing protein. (158 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTK1_BRAFL	C3XUA9_BRAFL	C3XTK1	C3XUA9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.643
C3XTK1_BRAFL	C3XW52_BRAFL	C3XTK1	C3XW52	Uncharacterized protein.	Uncharacterized protein.	0.405
C3XTK1_BRAFL	C3ZKQ3_BRAFL	C3XTK1	C3ZKQ3	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.456
C3XU82_BRAFL	C3ZS25_BRAFL	C3XU82	C3ZS25	C2H2-type domain-containing protein.	Uncharacterized protein.	0.487
C3XUA9_BRAFL	C3XTK1_BRAFL	C3XUA9	C3XTK1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.643
C3XVW7_BRAFL	C3Y9L4_BRAFL	C3XVW7	C3Y9L4	Uncharacterized protein.	Uncharacterized protein.	0.439
C3XVW7_BRAFL	C3YKE2_BRAFL	C3XVW7	C3YKE2	Uncharacterized protein.	Uncharacterized protein.	0.439
C3XW52_BRAFL	C3XTK1_BRAFL	C3XW52	C3XTK1	Uncharacterized protein.	Uncharacterized protein.	0.405
C3XW52_BRAFL	C3ZKQ3_BRAFL	C3XW52	C3ZKQ3	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.693
C3XW52_BRAFL	C3ZS25_BRAFL	C3XW52	C3ZS25	Uncharacterized protein.	Uncharacterized protein.	0.465
C3Y9L4_BRAFL	C3XVW7_BRAFL	C3Y9L4	C3XVW7	Uncharacterized protein.	Uncharacterized protein.	0.439
C3YCK7_BRAFL	C3YLJ3_BRAFL	C3YCK7	C3YLJ3	HECT domain-containing protein.	Uncharacterized protein.	0.915
C3YKE2_BRAFL	C3XVW7_BRAFL	C3YKE2	C3XVW7	Uncharacterized protein.	Uncharacterized protein.	0.439
C3YLJ2_BRAFL	C3YLJ3_BRAFL	C3YLJ2	C3YLJ3	HECT domain-containing protein.	Uncharacterized protein.	0.950
C3YLJ2_BRAFL	C3ZHY2_BRAFL	C3YLJ2	C3ZHY2	HECT domain-containing protein.	UBR-type domain-containing protein.	0.526
C3YLJ3_BRAFL	C3YCK7_BRAFL	C3YLJ3	C3YCK7	Uncharacterized protein.	HECT domain-containing protein.	0.915
C3YLJ3_BRAFL	C3YLJ2_BRAFL	C3YLJ3	C3YLJ2	Uncharacterized protein.	HECT domain-containing protein.	0.950
C3YLJ3_BRAFL	C3ZHY2_BRAFL	C3YLJ3	C3ZHY2	Uncharacterized protein.	UBR-type domain-containing protein.	0.526
C3YW12_BRAFL	C3Z2W5_BRAFL	C3YW12	C3Z2W5	GIY-YIG domain-containing protein.	THUMP domain-containing protein.	0.510
C3Z2W5_BRAFL	C3YW12_BRAFL	C3Z2W5	C3YW12	THUMP domain-containing protein.	GIY-YIG domain-containing protein.	0.510