53 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XRS1_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (504 aa)
	C3XRT6_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (374 aa)
	C3XTW3_BRAFL	Uncharacterized protein. (470 aa)
	C3XUG0_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (515 aa)
	C3XXC5_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (482 aa)
	C3Y0M2_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (494 aa)
	C3Y2Q8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (502 aa)
	C3Y4E1_BRAFL	Phospholipase A(2). (158 aa)
	C3Y4E2_BRAFL	Uncharacterized protein. (419 aa)
	C3Y6W3_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (514 aa)
	C3Y9A4_BRAFL	Cyclic nucleotide-binding domain-containing protein. (1446 aa)
	C3YDI1_BRAFL	PA2c domain-containing protein. (111 aa)
	C3YE18_BRAFL	ATP-grasp domain-containing protein. (874 aa)
	C3YEM7_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (508 aa)
	C3YFW6_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)
	C3YHB2_BRAFL	C2H2-type domain-containing protein. (822 aa)
	C3YIL6_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)
	C3YN11_BRAFL	Uncharacterized protein. (364 aa)
	C3YNA5_BRAFL	Phospholipase A(2). (108 aa)
	C3YUW3_BRAFL	Uncharacterized protein. (358 aa)
	C3YY13_BRAFL	PA2c domain-containing protein. (118 aa)
	C3YZA7_BRAFL	PA2c domain-containing protein. (228 aa)
	C3Z0R7_BRAFL	Lipoxygenase domain-containing protein. (327 aa)
	C3Z1I7_BRAFL	Lipoxygenase domain-containing protein. (361 aa)
	RdhL	Uncharacterized protein; Belongs to the cytochrome P450 family. (332 aa)
	C3Z3D8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (484 aa)
	C3Z400_BRAFL	GP-PDE domain-containing protein. (256 aa)
	C3Z4M0_BRAFL	Uncharacterized protein. (78 aa)
	C3Z4N2_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (497 aa)
	C3Z5V5_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (491 aa)
	C3Z6R1_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (497 aa)
	C3Z8F9_BRAFL	Phospholipase A(2). (131 aa)
	C3Z8G0_BRAFL	Phospholipase A(2). (150 aa)
	C3ZAC7_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (466 aa)
	C3ZBK9_BRAFL	TMEM189_B_dmain domain-containing protein. (268 aa)
	C3ZDD1_BRAFL	Uncharacterized protein. (1137 aa)
	C3ZDZ8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (475 aa)
	C3ZFB9_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)
	C3ZMZ4_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)
	C3ZPC9_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (497 aa)
	C3ZPD6_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (434 aa)
	C3ZPD8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (437 aa)
	C3ZS17_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (500 aa)
	C3ZSC3_BRAFL	Uncharacterized protein. (477 aa)
	C3ZTJ6_BRAFL	Uncharacterized protein. (471 aa)
	C3ZTS3_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (527 aa)
	C3ZVH6_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (328 aa)
	C3ZVT4_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (451 aa)
	C3ZW13_BRAFL	Uncharacterized protein. (858 aa)
	C3ZWS4_BRAFL	PLA2c domain-containing protein. (167 aa)
	C3ZWS9_BRAFL	EGF-like domain-containing protein. (710 aa)
	C3ZWX9_BRAFL	Cytochrome b5 heme-binding domain-containing protein. (423 aa)
	C3ZZU8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (511 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRS1_BRAFL	C3XRT6_BRAFL	C3XRS1	C3XRT6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.653
C3XRS1_BRAFL	C3XUG0_BRAFL	C3XRS1	C3XUG0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.670
C3XRS1_BRAFL	C3XXC5_BRAFL	C3XRS1	C3XXC5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.665
C3XRS1_BRAFL	C3Y0M2_BRAFL	C3XRS1	C3Y0M2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.666
C3XRS1_BRAFL	C3Y4E1_BRAFL	C3XRS1	C3Y4E1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Phospholipase A(2).	0.650
C3XRS1_BRAFL	C3Y4E2_BRAFL	C3XRS1	C3Y4E2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
C3XRS1_BRAFL	C3Y9A4_BRAFL	C3XRS1	C3Y9A4	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cyclic nucleotide-binding domain-containing protein.	0.650
C3XRS1_BRAFL	C3YDI1_BRAFL	C3XRS1	C3YDI1	Uncharacterized protein; Belongs to the cytochrome P450 family.	PA2c domain-containing protein.	0.661
C3XRS1_BRAFL	C3YE18_BRAFL	C3XRS1	C3YE18	Uncharacterized protein; Belongs to the cytochrome P450 family.	ATP-grasp domain-containing protein.	0.668
C3XRS1_BRAFL	C3YEM7_BRAFL	C3XRS1	C3YEM7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.669
C3XRS1_BRAFL	C3YIL6_BRAFL	C3XRS1	C3YIL6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.671
C3XRS1_BRAFL	C3YNA5_BRAFL	C3XRS1	C3YNA5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Phospholipase A(2).	0.650
C3XRS1_BRAFL	C3YUW3_BRAFL	C3XRS1	C3YUW3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.673
C3XRS1_BRAFL	C3YY13_BRAFL	C3XRS1	C3YY13	Uncharacterized protein; Belongs to the cytochrome P450 family.	PA2c domain-containing protein.	0.661
C3XRS1_BRAFL	C3YZA7_BRAFL	C3XRS1	C3YZA7	Uncharacterized protein; Belongs to the cytochrome P450 family.	PA2c domain-containing protein.	0.650
C3XRS1_BRAFL	C3Z0R7_BRAFL	C3XRS1	C3Z0R7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Lipoxygenase domain-containing protein.	0.656
C3XRS1_BRAFL	C3Z1I7_BRAFL	C3XRS1	C3Z1I7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Lipoxygenase domain-containing protein.	0.901
C3XRS1_BRAFL	C3Z4M0_BRAFL	C3XRS1	C3Z4M0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
C3XRS1_BRAFL	C3Z4N2_BRAFL	C3XRS1	C3Z4N2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.668
C3XRS1_BRAFL	C3Z6R1_BRAFL	C3XRS1	C3Z6R1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.668