(17 nodes) Resolution of meiotic recombination intermediates network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPU5_BRAFL	ERCC4 domain-containing protein. (1825 aa)
	C3XRP0_BRAFL	Uncharacterized protein. (2342 aa)
	C3Y0V4_BRAFL	ERCC4 domain-containing protein. (268 aa)
	C3Y0V8_BRAFL	ERCC4 domain-containing protein. (600 aa)
	C3Y0V9_BRAFL	Uncharacterized protein. (343 aa)
	C3Y458_BRAFL	DNA_mis_repair domain-containing protein. (717 aa)
	C3Y6J8_BRAFL	Uncharacterized protein. (156 aa)
	C3YAZ8_BRAFL	SEC63 domain-containing protein. (466 aa)
	C3YI31_BRAFL	DUF1767 domain-containing protein. (184 aa)
	C3YI56_BRAFL	Uncharacterized protein. (162 aa)
	C3YI58_BRAFL	TPR_REGION domain-containing protein. (720 aa)
	C3YQ02_BRAFL	LEM domain-containing protein. (1888 aa)
	C3YYJ6_BRAFL	TOP4c domain-containing protein. (1181 aa)
	C3Z6W7_BRAFL	ERCC4 domain-containing protein. (598 aa)
	C3ZNW9_BRAFL	ERCC4 domain-containing protein. (515 aa)
	C3ZNX8_BRAFL	Uncharacterized protein. (233 aa)
	C4A088_BRAFL	BTB domain-containing protein. (2428 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPU5_BRAFL	C3XRP0_BRAFL	C3XPU5	C3XRP0	ERCC4 domain-containing protein.	Uncharacterized protein.	0.964
C3XPU5_BRAFL	C3Y0V4_BRAFL	C3XPU5	C3Y0V4	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.540
C3XPU5_BRAFL	C3Y0V8_BRAFL	C3XPU5	C3Y0V8	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.540
C3XPU5_BRAFL	C3Y0V9_BRAFL	C3XPU5	C3Y0V9	ERCC4 domain-containing protein.	Uncharacterized protein.	0.540
C3XPU5_BRAFL	C3YI31_BRAFL	C3XPU5	C3YI31	ERCC4 domain-containing protein.	DUF1767 domain-containing protein.	0.661
C3XPU5_BRAFL	C3Z6W7_BRAFL	C3XPU5	C3Z6W7	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.960
C3XPU5_BRAFL	C3ZNW9_BRAFL	C3XPU5	C3ZNW9	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.613
C3XPU5_BRAFL	C3ZNX8_BRAFL	C3XPU5	C3ZNX8	ERCC4 domain-containing protein.	Uncharacterized protein.	0.613
C3XPU5_BRAFL	C4A088_BRAFL	C3XPU5	C4A088	ERCC4 domain-containing protein.	BTB domain-containing protein.	0.586
C3XRP0_BRAFL	C3XPU5_BRAFL	C3XRP0	C3XPU5	Uncharacterized protein.	ERCC4 domain-containing protein.	0.964
C3XRP0_BRAFL	C3Y0V4_BRAFL	C3XRP0	C3Y0V4	Uncharacterized protein.	ERCC4 domain-containing protein.	0.964
C3XRP0_BRAFL	C3Y0V8_BRAFL	C3XRP0	C3Y0V8	Uncharacterized protein.	ERCC4 domain-containing protein.	0.964
C3XRP0_BRAFL	C3Y0V9_BRAFL	C3XRP0	C3Y0V9	Uncharacterized protein.	Uncharacterized protein.	0.964
C3XRP0_BRAFL	C3Y458_BRAFL	C3XRP0	C3Y458	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.745
C3XRP0_BRAFL	C3Y6J8_BRAFL	C3XRP0	C3Y6J8	Uncharacterized protein.	Uncharacterized protein.	0.964
C3XRP0_BRAFL	C3YI31_BRAFL	C3XRP0	C3YI31	Uncharacterized protein.	DUF1767 domain-containing protein.	0.995
C3XRP0_BRAFL	C3YYJ6_BRAFL	C3XRP0	C3YYJ6	Uncharacterized protein.	TOP4c domain-containing protein.	0.547
C3XRP0_BRAFL	C3Z6W7_BRAFL	C3XRP0	C3Z6W7	Uncharacterized protein.	ERCC4 domain-containing protein.	0.558
C3XRP0_BRAFL	C3ZNW9_BRAFL	C3XRP0	C3ZNW9	Uncharacterized protein.	ERCC4 domain-containing protein.	0.572
C3XRP0_BRAFL	C3ZNX8_BRAFL	C3XRP0	C3ZNX8	Uncharacterized protein.	Uncharacterized protein.	0.572