(5 nodes) Adenyl-nucleotide exchange factor activity network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XZT9_BRAFL	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (223 aa)
	C4A0A7_BRAFL	Uncharacterized protein. (177 aa)
	C3YMM0_BRAFL	Uncharacterized protein. (381 aa)
	C3Y5L6_BRAFL	Fes1 domain-containing protein. (332 aa)
	C3XZU0_BRAFL	FTP domain-containing protein. (990 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZU0_BRAFL	C3YMM0_BRAFL	C3XZU0	C3YMM0	FTP domain-containing protein.	Uncharacterized protein.	0.569
C3Y5L6_BRAFL	C3YMM0_BRAFL	C3Y5L6	C3YMM0	Fes1 domain-containing protein.	Uncharacterized protein.	0.569
C3Y5L6_BRAFL	C4A0A7_BRAFL	C3Y5L6	C4A0A7	Fes1 domain-containing protein.	Uncharacterized protein.	0.925
C3YMM0_BRAFL	C3XZU0_BRAFL	C3YMM0	C3XZU0	Uncharacterized protein.	FTP domain-containing protein.	0.569
C3YMM0_BRAFL	C3Y5L6_BRAFL	C3YMM0	C3Y5L6	Uncharacterized protein.	Fes1 domain-containing protein.	0.569
C3YMM0_BRAFL	C4A0A7_BRAFL	C3YMM0	C4A0A7	Uncharacterized protein.	Uncharacterized protein.	0.976
C4A0A7_BRAFL	C3Y5L6_BRAFL	C4A0A7	C3Y5L6	Uncharacterized protein.	Fes1 domain-containing protein.	0.925
C4A0A7_BRAFL	C3YMM0_BRAFL	C4A0A7	C3YMM0	Uncharacterized protein.	Uncharacterized protein.	0.976