(35 nodes) p53 binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPU2_BRAFL	Uncharacterized protein. (649 aa)
	C3XT78_BRAFL	Uncharacterized protein. (458 aa)
	C3XU33_BRAFL	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (627 aa)
	C3XVM0_BRAFL	Uncharacterized protein. (72 aa)
	C3Y8N4_BRAFL	Helicase C-terminal domain-containing protein. (591 aa)
	C3YBF4_BRAFL	Uncharacterized protein. (2359 aa)
	C3YDJ4_BRAFL	RING-type domain-containing protein. (299 aa)
	C3YKR1_BRAFL	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (666 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YLI3_BRAFL	PHD-type domain-containing protein. (1052 aa)
	C3YQW4_BRAFL	Protein kinase domain-containing protein. (356 aa)
	C3YXH3_BRAFL	Uncharacterized protein. (416 aa)
	C3YZM5_BRAFL	Uncharacterized protein. (453 aa)
	C3Z126_BRAFL	Ubiquitin carboxyl-terminal hydrolase. (402 aa)
	C3Z291_BRAFL	RING-type domain-containing protein. (668 aa)
	C3Z2E7_BRAFL	Muscle-specific homeobox-like protein. (307 aa)
	C3Z427_BRAFL	FYVE-type domain-containing protein. (325 aa)
	C3Z4J5_BRAFL	Uncharacterized protein. (2574 aa)
	C3Z6I4_BRAFL	Uncharacterized protein. (107 aa)
	C3ZAV8_BRAFL	Protein kinase domain-containing protein. (287 aa)
	C3ZBQ9_BRAFL	Helicase ATP-binding domain-containing protein. (270 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZHI0_BRAFL	Helicase ATP-binding domain-containing protein. (504 aa)
	C3ZIW3_BRAFL	P53 domain-containing protein. (82 aa)
	C3ZLH8_BRAFL	Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
	C3ZP40_BRAFL	Uncharacterized protein. (171 aa)
	C3ZPA3_BRAFL	Daxx domain-containing protein. (323 aa)
	C3ZPX7_BRAFL	Uncharacterized protein; Belongs to the peptidase C19 family. (1046 aa)
	C3ZQG4_BRAFL	Uncharacterized protein. (183 aa)
	C3ZR37_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	C3ZR83_BRAFL	Uncharacterized protein. (459 aa)
	C3ZUG6_BRAFL	Uncharacterized protein. (3563 aa)
	C3ZXI3_BRAFL	TAZ-type domain-containing protein. (131 aa)
	Msx	Muscle segment homeobox. (275 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPU2_BRAFL	C3YBF4_BRAFL	C3XPU2	C3YBF4	Uncharacterized protein.	Uncharacterized protein.	0.505
C3XPU2_BRAFL	C3Z126_BRAFL	C3XPU2	C3Z126	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.454
C3XPU2_BRAFL	C3ZAV8_BRAFL	C3XPU2	C3ZAV8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.539
C3XPU2_BRAFL	C3ZR37_BRAFL	C3XPU2	C3ZR37	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.516
C3XT78_BRAFL	C3YBF4_BRAFL	C3XT78	C3YBF4	Uncharacterized protein.	Uncharacterized protein.	0.443
C3XU33_BRAFL	C3Z4J5_BRAFL	C3XU33	C3Z4J5	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein.	0.740
C3Y8N4_BRAFL	C3YBF4_BRAFL	C3Y8N4	C3YBF4	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.443
C3Y8N4_BRAFL	C3YZM5_BRAFL	C3Y8N4	C3YZM5	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.536
C3Y8N4_BRAFL	C3ZBQ9_BRAFL	C3Y8N4	C3ZBQ9	Helicase C-terminal domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.537
C3Y8N4_BRAFL	C3ZHI0_BRAFL	C3Y8N4	C3ZHI0	Helicase C-terminal domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.536
C3YBF4_BRAFL	C3XPU2_BRAFL	C3YBF4	C3XPU2	Uncharacterized protein.	Uncharacterized protein.	0.505
C3YBF4_BRAFL	C3XT78_BRAFL	C3YBF4	C3XT78	Uncharacterized protein.	Uncharacterized protein.	0.443
C3YBF4_BRAFL	C3Y8N4_BRAFL	C3YBF4	C3Y8N4	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.443
C3YBF4_BRAFL	C3YKR1_BRAFL	C3YBF4	C3YKR1	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.443
C3YBF4_BRAFL	C3YXH3_BRAFL	C3YBF4	C3YXH3	Uncharacterized protein.	Uncharacterized protein.	0.505
C3YBF4_BRAFL	C3YZM5_BRAFL	C3YBF4	C3YZM5	Uncharacterized protein.	Uncharacterized protein.	0.443
C3YBF4_BRAFL	C3Z6I4_BRAFL	C3YBF4	C3Z6I4	Uncharacterized protein.	Uncharacterized protein.	0.443
C3YBF4_BRAFL	C3ZBQ9_BRAFL	C3YBF4	C3ZBQ9	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.443
C3YBF4_BRAFL	C3ZHI0_BRAFL	C3YBF4	C3ZHI0	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.443
C3YBF4_BRAFL	C3ZIW3_BRAFL	C3YBF4	C3ZIW3	Uncharacterized protein.	P53 domain-containing protein.	0.505