(8 nodes) Death receptor binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XRZ2_BRAFL	Uncharacterized protein. (693 aa)
	C3Z4P8_BRAFL	Uncharacterized protein. (195 aa)
	C3ZDW2_BRAFL	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (374 aa)
	C3ZDW4_BRAFL	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (288 aa)
	C3ZDW6_BRAFL	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (412 aa)
	C3ZXZ8_BRAFL	Death domain-containing protein. (298 aa)
	C3ZZM6_BRAFL	Uncharacterized protein. (197 aa)
	C3YE67_BRAFL	Uncharacterized protein; Belongs to the tumor necrosis factor family. (180 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRZ2_BRAFL	C3YE67_BRAFL	C3XRZ2	C3YE67	Uncharacterized protein.	Uncharacterized protein; Belongs to the tumor necrosis factor family.	0.467
C3XRZ2_BRAFL	C3ZDW2_BRAFL	C3XRZ2	C3ZDW2	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.595
C3XRZ2_BRAFL	C3ZDW6_BRAFL	C3XRZ2	C3ZDW6	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.595
C3YE67_BRAFL	C3XRZ2_BRAFL	C3YE67	C3XRZ2	Uncharacterized protein; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.467
C3Z4P8_BRAFL	C3ZXZ8_BRAFL	C3Z4P8	C3ZXZ8	Uncharacterized protein.	Death domain-containing protein.	0.540
C3Z4P8_BRAFL	C3ZZM6_BRAFL	C3Z4P8	C3ZZM6	Uncharacterized protein.	Uncharacterized protein.	0.544
C3ZDW2_BRAFL	C3XRZ2_BRAFL	C3ZDW2	C3XRZ2	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.595
C3ZDW6_BRAFL	C3XRZ2_BRAFL	C3ZDW6	C3XRZ2	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.595
C3ZXZ8_BRAFL	C3Z4P8_BRAFL	C3ZXZ8	C3Z4P8	Death domain-containing protein.	Uncharacterized protein.	0.540
C3ZXZ8_BRAFL	C3ZZM6_BRAFL	C3ZXZ8	C3ZZM6	Death domain-containing protein.	Uncharacterized protein.	0.540
C3ZZM6_BRAFL	C3Z4P8_BRAFL	C3ZZM6	C3Z4P8	Uncharacterized protein.	Uncharacterized protein.	0.544
C3ZZM6_BRAFL	C3ZXZ8_BRAFL	C3ZZM6	C3ZXZ8	Uncharacterized protein.	Death domain-containing protein.	0.540