(11 nodes) Pericentric heterochromatin network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZSR0_BRAFL	CBFD_NFYB_HMF domain-containing protein. (125 aa)
	C3Y0C2_BRAFL	Uncharacterized protein. (1564 aa)
	C3Y212_BRAFL	Deacetylase sirtuin-type domain-containing protein. (414 aa)
	C3Y7L2_BRAFL	INCENP_ARK-bind domain-containing protein. (1201 aa)
	C3YII8_BRAFL	CENP-C_C domain-containing protein. (1118 aa)
	C3YQU2_BRAFL	Uncharacterized protein. (1003 aa)
	C3YZQ2_BRAFL	Cytosine-specific methyltransferase. (1275 aa)
	C3YZR1_BRAFL	Uncharacterized protein. (490 aa)
	C3Z2H0_BRAFL	Cnd1 domain-containing protein. (1141 aa)
	C3Z479_BRAFL	WD_REPEATS_REGION domain-containing protein. (742 aa)
	C3ZHW1_BRAFL	Uncharacterized protein. (1570 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0C2_BRAFL	C3ZHW1_BRAFL	C3Y0C2	C3ZHW1	Uncharacterized protein.	Uncharacterized protein.	0.670
C3Y0C2_BRAFL	C3ZSR0_BRAFL	C3Y0C2	C3ZSR0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.943
C3YZQ2_BRAFL	C3YZR1_BRAFL	C3YZQ2	C3YZR1	Cytosine-specific methyltransferase.	Uncharacterized protein.	0.410
C3YZR1_BRAFL	C3YZQ2_BRAFL	C3YZR1	C3YZQ2	Uncharacterized protein.	Cytosine-specific methyltransferase.	0.410
C3YZR1_BRAFL	C3ZHW1_BRAFL	C3YZR1	C3ZHW1	Uncharacterized protein.	Uncharacterized protein.	0.426
C3ZHW1_BRAFL	C3Y0C2_BRAFL	C3ZHW1	C3Y0C2	Uncharacterized protein.	Uncharacterized protein.	0.670
C3ZHW1_BRAFL	C3YZR1_BRAFL	C3ZHW1	C3YZR1	Uncharacterized protein.	Uncharacterized protein.	0.426
C3ZHW1_BRAFL	C3ZSR0_BRAFL	C3ZHW1	C3ZSR0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.744
C3ZSR0_BRAFL	C3Y0C2_BRAFL	C3ZSR0	C3Y0C2	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.943
C3ZSR0_BRAFL	C3ZHW1_BRAFL	C3ZSR0	C3ZHW1	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.744