(30 nodes) Axonemal microtubule network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XTU3_BRAFL	C2 domain-containing protein. (1222 aa)
	C3XVZ0_BRAFL	Uncharacterized protein. (221 aa)
	C3Y1N6_BRAFL	Uncharacterized protein. (483 aa)
	C3YBH5_BRAFL	Uncharacterized protein. (193 aa)
	C3YBH6_BRAFL	Uncharacterized protein. (990 aa)
	C3YCA1_BRAFL	WD_REPEATS_REGION domain-containing protein. (625 aa)
	C3YDQ7_BRAFL	Uncharacterized protein. (499 aa)
	C3YF46_BRAFL	Uncharacterized protein. (420 aa)
	C3YKY7_BRAFL	Uncharacterized protein. (149 aa)
	C3YQF2_BRAFL	Uncharacterized protein. (641 aa)
	C3YSP0_BRAFL	Uncharacterized protein. (499 aa)
	C3YTW1_BRAFL	Uncharacterized protein. (311 aa)
	C3YYJ1_BRAFL	Uncharacterized protein. (577 aa)
	C3Z2Q4_BRAFL	Uncharacterized protein. (379 aa)
	C3Z317_BRAFL	Uncharacterized protein. (270 aa)
	C3Z327_BRAFL	Uncharacterized protein. (239 aa)
	C3Z3P2_BRAFL	Uncharacterized protein. (100 aa)
	C3Z7W1_BRAFL	Uncharacterized protein. (434 aa)
	C3ZA11_BRAFL	Uncharacterized protein. (206 aa)
	C3ZB94_BRAFL	DUF667 domain-containing protein. (193 aa)
	C3ZB95_BRAFL	DUF667 domain-containing protein. (194 aa)
	C3ZDQ1_BRAFL	Uncharacterized protein. (722 aa)
	C3ZI55_BRAFL	Uncharacterized protein. (221 aa)
	C3ZI60_BRAFL	Uncharacterized protein. (555 aa)
	C3ZI84_BRAFL	Uncharacterized protein. (253 aa)
	C3ZL48_BRAFL	Uncharacterized protein. (402 aa)
	C3ZMQ7_BRAFL	Uncharacterized protein. (445 aa)
	C3ZR63_BRAFL	Enkurin domain-containing protein. (276 aa)
	C3ZS54_BRAFL	Nucleoside diphosphate kinase. (374 aa)
	C3ZTM2_BRAFL	Nuclear receptor domain-containing protein. (1232 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XVZ0_BRAFL	C3YCA1_BRAFL	C3XVZ0	C3YCA1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.849
C3XVZ0_BRAFL	C3YDQ7_BRAFL	C3XVZ0	C3YDQ7	Uncharacterized protein.	Uncharacterized protein.	0.821
C3XVZ0_BRAFL	C3YF46_BRAFL	C3XVZ0	C3YF46	Uncharacterized protein.	Uncharacterized protein.	0.829
C3XVZ0_BRAFL	C3YKY7_BRAFL	C3XVZ0	C3YKY7	Uncharacterized protein.	Uncharacterized protein.	0.826
C3XVZ0_BRAFL	C3YQF2_BRAFL	C3XVZ0	C3YQF2	Uncharacterized protein.	Uncharacterized protein.	0.924
C3XVZ0_BRAFL	C3YSP0_BRAFL	C3XVZ0	C3YSP0	Uncharacterized protein.	Uncharacterized protein.	0.817
C3XVZ0_BRAFL	C3YTW1_BRAFL	C3XVZ0	C3YTW1	Uncharacterized protein.	Uncharacterized protein.	0.402
C3XVZ0_BRAFL	C3YYJ1_BRAFL	C3XVZ0	C3YYJ1	Uncharacterized protein.	Uncharacterized protein.	0.886
C3XVZ0_BRAFL	C3Z2Q4_BRAFL	C3XVZ0	C3Z2Q4	Uncharacterized protein.	Uncharacterized protein.	0.809
C3XVZ0_BRAFL	C3Z3P2_BRAFL	C3XVZ0	C3Z3P2	Uncharacterized protein.	Uncharacterized protein.	0.833
C3XVZ0_BRAFL	C3ZA11_BRAFL	C3XVZ0	C3ZA11	Uncharacterized protein.	Uncharacterized protein.	0.820
C3XVZ0_BRAFL	C3ZB94_BRAFL	C3XVZ0	C3ZB94	Uncharacterized protein.	DUF667 domain-containing protein.	0.566
C3XVZ0_BRAFL	C3ZB95_BRAFL	C3XVZ0	C3ZB95	Uncharacterized protein.	DUF667 domain-containing protein.	0.566
C3XVZ0_BRAFL	C3ZDQ1_BRAFL	C3XVZ0	C3ZDQ1	Uncharacterized protein.	Uncharacterized protein.	0.937
C3XVZ0_BRAFL	C3ZI55_BRAFL	C3XVZ0	C3ZI55	Uncharacterized protein.	Uncharacterized protein.	0.817
C3XVZ0_BRAFL	C3ZI60_BRAFL	C3XVZ0	C3ZI60	Uncharacterized protein.	Uncharacterized protein.	0.833
C3XVZ0_BRAFL	C3ZI84_BRAFL	C3XVZ0	C3ZI84	Uncharacterized protein.	Uncharacterized protein.	0.824
C3XVZ0_BRAFL	C3ZL48_BRAFL	C3XVZ0	C3ZL48	Uncharacterized protein.	Uncharacterized protein.	0.442
C3XVZ0_BRAFL	C3ZMQ7_BRAFL	C3XVZ0	C3ZMQ7	Uncharacterized protein.	Uncharacterized protein.	0.442
C3XVZ0_BRAFL	C3ZR63_BRAFL	C3XVZ0	C3ZR63	Uncharacterized protein.	Enkurin domain-containing protein.	0.938