STRINGSTRING
C3XSQ5_BRAFL C3XSQ5_BRAFL C3Y126_BRAFL C3Y126_BRAFL C3Y9T1_BRAFL C3Y9T1_BRAFL C3YMM5_BRAFL C3YMM5_BRAFL C3YPZ5_BRAFL C3YPZ5_BRAFL C3YVL4_BRAFL C3YVL4_BRAFL C3ZL61_BRAFL C3ZL61_BRAFL C3ZL74_BRAFL C3ZL74_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XSQ5_BRAFLSHMT domain-containing protein. (406 aa)
C3Y126_BRAFLSerine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (509 aa)
C3Y9T1_BRAFLPALP domain-containing protein. (451 aa)
C3YMM5_BRAFLPALP domain-containing protein. (326 aa)
C3YPZ5_BRAFLPALP domain-containing protein. (113 aa)
C3YVL4_BRAFLPALP domain-containing protein. (327 aa)
C3ZL61_BRAFLPALP domain-containing protein. (128 aa)
C3ZL74_BRAFLUncharacterized protein. (203 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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