(21 nodes) Cellular zinc ion homeostasis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y649_BRAFL	Uncharacterized protein. (810 aa)
	C3YB93_BRAFL	Uncharacterized protein. (749 aa)
	C3YKG4_BRAFL	Uncharacterized protein. (154 aa)
	C3YKX8_BRAFL	Uncharacterized protein. (384 aa)
	C3YN35_BRAFL	ZIP4_domain domain-containing protein. (702 aa)
	C3YT19_BRAFL	Uncharacterized protein. (373 aa)
	C3YZA2_BRAFL	Uncharacterized protein. (868 aa)
	C3ZBA0_BRAFL	AXH domain-containing protein. (1730 aa)
	C3ZCM1_BRAFL	Uncharacterized protein. (492 aa)
	C3ZGV0_BRAFL	Uncharacterized protein. (162 aa)
	C3ZGV1_BRAFL	Uncharacterized protein. (332 aa)
	C3ZGV2_BRAFL	Uncharacterized protein. (511 aa)
	C3Y646_BRAFL	Uncharacterized protein. (340 aa)
	C3Y644_BRAFL	Uncharacterized protein. (362 aa)
	C3Y643_BRAFL	Uncharacterized protein. (380 aa)
	C3Y5V4_BRAFL	Uncharacterized protein. (686 aa)
	C3Y490_BRAFL	Uncharacterized protein. (402 aa)
	C3Y489_BRAFL	Uncharacterized protein. (380 aa)
	C3Y1T4_BRAFL	Uncharacterized protein. (734 aa)
	C3XYQ9_BRAFL	ZIP4_domain domain-containing protein. (557 aa)
	C3XYQ8_BRAFL	Uncharacterized protein. (155 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y1T4_BRAFL	C3Y489_BRAFL	C3Y1T4	C3Y489	Uncharacterized protein.	Uncharacterized protein.	0.402
C3Y1T4_BRAFL	C3Y490_BRAFL	C3Y1T4	C3Y490	Uncharacterized protein.	Uncharacterized protein.	0.402
C3Y1T4_BRAFL	C3YN35_BRAFL	C3Y1T4	C3YN35	Uncharacterized protein.	ZIP4_domain domain-containing protein.	0.430
C3Y1T4_BRAFL	C3YZA2_BRAFL	C3Y1T4	C3YZA2	Uncharacterized protein.	Uncharacterized protein.	0.558
C3Y1T4_BRAFL	C3ZCM1_BRAFL	C3Y1T4	C3ZCM1	Uncharacterized protein.	Uncharacterized protein.	0.553
C3Y489_BRAFL	C3Y1T4_BRAFL	C3Y489	C3Y1T4	Uncharacterized protein.	Uncharacterized protein.	0.402
C3Y489_BRAFL	C3YN35_BRAFL	C3Y489	C3YN35	Uncharacterized protein.	ZIP4_domain domain-containing protein.	0.437
C3Y490_BRAFL	C3Y1T4_BRAFL	C3Y490	C3Y1T4	Uncharacterized protein.	Uncharacterized protein.	0.402
C3YN35_BRAFL	C3Y1T4_BRAFL	C3YN35	C3Y1T4	ZIP4_domain domain-containing protein.	Uncharacterized protein.	0.430
C3YN35_BRAFL	C3Y489_BRAFL	C3YN35	C3Y489	ZIP4_domain domain-containing protein.	Uncharacterized protein.	0.437
C3YN35_BRAFL	C3YT19_BRAFL	C3YN35	C3YT19	ZIP4_domain domain-containing protein.	Uncharacterized protein.	0.468
C3YN35_BRAFL	C3YZA2_BRAFL	C3YN35	C3YZA2	ZIP4_domain domain-containing protein.	Uncharacterized protein.	0.424
C3YT19_BRAFL	C3YN35_BRAFL	C3YT19	C3YN35	Uncharacterized protein.	ZIP4_domain domain-containing protein.	0.468
C3YT19_BRAFL	C3YZA2_BRAFL	C3YT19	C3YZA2	Uncharacterized protein.	Uncharacterized protein.	0.568
C3YT19_BRAFL	C3ZCM1_BRAFL	C3YT19	C3ZCM1	Uncharacterized protein.	Uncharacterized protein.	0.554
C3YZA2_BRAFL	C3Y1T4_BRAFL	C3YZA2	C3Y1T4	Uncharacterized protein.	Uncharacterized protein.	0.558
C3YZA2_BRAFL	C3YN35_BRAFL	C3YZA2	C3YN35	Uncharacterized protein.	ZIP4_domain domain-containing protein.	0.424
C3YZA2_BRAFL	C3YT19_BRAFL	C3YZA2	C3YT19	Uncharacterized protein.	Uncharacterized protein.	0.568
C3YZA2_BRAFL	C3ZCM1_BRAFL	C3YZA2	C3ZCM1	Uncharacterized protein.	Uncharacterized protein.	0.563
C3ZCM1_BRAFL	C3Y1T4_BRAFL	C3ZCM1	C3Y1T4	Uncharacterized protein.	Uncharacterized protein.	0.553