(21 nodes) I-kappaB kinase/NF-kappaB signaling network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XX83_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (304 aa)
	C3XW52_BRAFL	Uncharacterized protein. (734 aa)
	C3XR39_BRAFL	RHD domain-containing protein. (278 aa)
	C4A097_BRAFL	FHA domain-containing protein. (336 aa)
	C3XSB3_BRAFL	Uncharacterized protein. (178 aa)
	C3ZXG1_BRAFL	Uncharacterized protein. (122 aa)
	C3ZPZ7_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (451 aa)
	C3ZXB3_BRAFL	FHA domain-containing protein. (179 aa)
	C3ZPP9_BRAFL	Uncharacterized protein. (177 aa)
	C3ZNP8_BRAFL	Protein kinase domain-containing protein. (634 aa)
	C3ZH58_BRAFL	Protein kinase domain-containing protein. (1633 aa)
	C3YXA6_BRAFL	Uncharacterized protein. (250 aa)
	C3YXA3_BRAFL	Uncharacterized protein. (227 aa)
	C3YUP9_BRAFL	Protein kinase domain-containing protein. (925 aa)
	C3YFT5_BRAFL	Protein kinase domain-containing protein. (755 aa)
	C3YDV1_BRAFL	Protein kinase domain-containing protein. (1102 aa)
	C3Y7F3_BRAFL	Protein kinase domain-containing protein. (702 aa)
	C3Y276_BRAFL	Uncharacterized protein. (902 aa)
	C3Y165_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
	C3Y164_BRAFL	Protein kinase domain-containing protein. (184 aa)
	C3XZR9_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (335 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR39_BRAFL	C3YDV1_BRAFL	C3XR39	C3YDV1	RHD domain-containing protein.	Protein kinase domain-containing protein.	0.502
C3XR39_BRAFL	C3YFT5_BRAFL	C3XR39	C3YFT5	RHD domain-containing protein.	Protein kinase domain-containing protein.	0.748
C3XR39_BRAFL	C3ZH58_BRAFL	C3XR39	C3ZH58	RHD domain-containing protein.	Protein kinase domain-containing protein.	0.502
C3XR39_BRAFL	C3ZPP9_BRAFL	C3XR39	C3ZPP9	RHD domain-containing protein.	Uncharacterized protein.	0.440
C3XR39_BRAFL	C3ZXG1_BRAFL	C3XR39	C3ZXG1	RHD domain-containing protein.	Uncharacterized protein.	0.748
C3XZR9_BRAFL	C3YFT5_BRAFL	C3XZR9	C3YFT5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.464
C3XZR9_BRAFL	C3ZNP8_BRAFL	C3XZR9	C3ZNP8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.534
C3Y7F3_BRAFL	C3ZNP8_BRAFL	C3Y7F3	C3ZNP8	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.494
C3YDV1_BRAFL	C3XR39_BRAFL	C3YDV1	C3XR39	Protein kinase domain-containing protein.	RHD domain-containing protein.	0.502
C3YDV1_BRAFL	C3YFT5_BRAFL	C3YDV1	C3YFT5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.700
C3YDV1_BRAFL	C3ZXG1_BRAFL	C3YDV1	C3ZXG1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.700
C3YFT5_BRAFL	C3XR39_BRAFL	C3YFT5	C3XR39	Protein kinase domain-containing protein.	RHD domain-containing protein.	0.748
C3YFT5_BRAFL	C3XZR9_BRAFL	C3YFT5	C3XZR9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.464
C3YFT5_BRAFL	C3YDV1_BRAFL	C3YFT5	C3YDV1	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.700
C3YFT5_BRAFL	C3YUP9_BRAFL	C3YFT5	C3YUP9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.481
C3YFT5_BRAFL	C3ZH58_BRAFL	C3YFT5	C3ZH58	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.700
C3YFT5_BRAFL	C3ZNP8_BRAFL	C3YFT5	C3ZNP8	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.762
C3YFT5_BRAFL	C3ZXG1_BRAFL	C3YFT5	C3ZXG1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.540
C3YUP9_BRAFL	C3YFT5_BRAFL	C3YUP9	C3YFT5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.481
C3YUP9_BRAFL	C3ZNP8_BRAFL	C3YUP9	C3ZNP8	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.545