(81 nodes) Ras protein signal transduction network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZIB9_BRAFL	Uncharacterized protein. (191 aa)
	C3ZJE1_BRAFL	Uncharacterized protein. (142 aa)
	C3ZMJ1_BRAFL	Uncharacterized protein. (188 aa)
	C3ZPN3_BRAFL	Uncharacterized protein. (365 aa)
	C3ZPP9_BRAFL	Uncharacterized protein. (177 aa)
	C3ZRX6_BRAFL	Uncharacterized protein. (184 aa)
	C3XPY8_BRAFL	Uncharacterized protein. (1177 aa)
	C3XQ95_BRAFL	Neuroblastoma RAS viral oncogene-like protein. (189 aa)
	C3XR84_BRAFL	Uncharacterized protein. (187 aa)
	C3XXZ2_BRAFL	PDZ domain-containing protein. (97 aa)
	C3XYQ7_BRAFL	Uncharacterized protein. (1701 aa)
	C3XZC9_BRAFL	Uncharacterized protein. (207 aa)
	C3XZI5_BRAFL	Uncharacterized protein. (1222 aa)
	C3Y164_BRAFL	Protein kinase domain-containing protein. (184 aa)
	C3Y165_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
	C3Y2K9_BRAFL	Uncharacterized protein. (402 aa)
	C3Y3S0_BRAFL	Uncharacterized protein. (586 aa)
	C3Y3S1_BRAFL	Uncharacterized protein. (567 aa)
	C3Y3S2_BRAFL	Uncharacterized protein. (610 aa)
	C3Y4C7_BRAFL	Uncharacterized protein. (1023 aa)
	C3Y512_BRAFL	Uncharacterized protein. (398 aa)
	C3Y6Q0_BRAFL	PH domain-containing protein. (455 aa)
	C3Y719_BRAFL	Uncharacterized protein. (391 aa)
	C3Y7J2_BRAFL	Uncharacterized protein. (687 aa)
	C3Y7L4_BRAFL	Uncharacterized protein. (197 aa)
	C3Y7Q2_BRAFL	TPR_REGION domain-containing protein. (280 aa)
	C3Y922_BRAFL	Uncharacterized protein. (546 aa)
	C3YAN5_BRAFL	Uncharacterized protein. (298 aa)
	C3YD20_BRAFL	Uncharacterized protein. (528 aa)
	C3YE46_BRAFL	Importin N-terminal domain-containing protein. (951 aa)
	C3YE60_BRAFL	Importin N-terminal domain-containing protein. (951 aa)
	C3YG08_BRAFL	SH3 domain-containing protein. (169 aa)
	C3YG10_BRAFL	PTB domain-containing protein. (662 aa)
	C3YG11_BRAFL	SAM_3 domain-containing protein. (571 aa)
	C3YJ52_BRAFL	Phosphoinositide phospholipase C. (1255 aa)
	C3YK58_BRAFL	Uncharacterized protein. (159 aa)
	C3YPI0_BRAFL	Uncharacterized protein. (472 aa)
	C3YQP4_BRAFL	BZIP domain-containing protein; Belongs to the bZIP family. (321 aa)
	C3YQW4_BRAFL	Protein kinase domain-containing protein. (356 aa)
	C3YRQ1_BRAFL	Uncharacterized protein. (231 aa)
	C3YRR2_BRAFL	Uncharacterized protein. (206 aa)
	C3YRV4_BRAFL	Uncharacterized protein. (198 aa)
	C3YSL3_BRAFL	Uncharacterized protein. (431 aa)
	C3YSL4_BRAFL	Uncharacterized protein. (655 aa)
	C3YUV2_BRAFL	TPR_REGION domain-containing protein. (151 aa)
	C3YW62_BRAFL	Uncharacterized protein. (196 aa)
	C3YW66_BRAFL	Ras-related protein rab-9a. (180 aa)
	C3YX80_BRAFL	Uncharacterized protein. (219 aa)
	C3YX87_BRAFL	Uncharacterized protein. (219 aa)
	C3YZQ2_BRAFL	Cytosine-specific methyltransferase. (1275 aa)
	C3Z2J6_BRAFL	KLRAQ domain-containing protein. (785 aa)
	C3Z355_BRAFL	Uncharacterized protein. (201 aa)
	C3Z3K0_BRAFL	Uncharacterized protein. (556 aa)
	C3Z473_BRAFL	Uncharacterized protein. (207 aa)
	C3Z5H5_BRAFL	Uncharacterized protein. (474 aa)
	C3Z5J6_BRAFL	Uncharacterized protein. (436 aa)
	C3Z6Y5_BRAFL	Uncharacterized protein. (177 aa)
	C3Z6Y6_BRAFL	Uncharacterized protein. (266 aa)
	C3Z7A3_BRAFL	Uncharacterized protein. (834 aa)
	C3Z7Y7_BRAFL	TPR_REGION domain-containing protein. (318 aa)
	C3Z8A2_BRAFL	RB_A domain-containing protein. (305 aa)
	C3ZAF6_BRAFL	Uncharacterized protein. (185 aa)
	C3ZAI7_BRAFL	PX domain-containing protein. (463 aa)
	C3ZAJ1_BRAFL	Uncharacterized protein. (599 aa)
	C3ZBY1_BRAFL	Uncharacterized protein. (983 aa)
	C3ZF24_BRAFL	Uncharacterized protein. (320 aa)
	C3ZGC1_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (400 aa)
	C3ZH14_BRAFL	Uncharacterized protein. (1202 aa)
	C3ZH15_BRAFL	Uncharacterized protein. (259 aa)
	C3ZT92_BRAFL	HTH La-type RNA-binding domain-containing protein. (1654 aa)
	C3ZV30_BRAFL	Uncharacterized protein. (865 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)
	C3ZVB3_BRAFL	Uncharacterized protein. (104 aa)
	C3ZW44_BRAFL	Uncharacterized protein. (172 aa)
	C3ZWT9_BRAFL	PH domain-containing protein. (125 aa)
	C3ZWU3_BRAFL	Ras-GEF domain-containing protein. (256 aa)
	C3ZXS7_BRAFL	TPR_REGION domain-containing protein. (273 aa)
	C3ZXZ4_BRAFL	PTB domain-containing protein. (370 aa)
	C3ZXZ5_BRAFL	SAM_3 domain-containing protein. (61 aa)
	C3ZYH7_BRAFL	Ras-GEF domain-containing protein. (205 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQ95_BRAFL	C3XYQ7_BRAFL	C3XQ95	C3XYQ7	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.482
C3XQ95_BRAFL	C3XZI5_BRAFL	C3XQ95	C3XZI5	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.971
C3XQ95_BRAFL	C3Y2K9_BRAFL	C3XQ95	C3Y2K9	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.416
C3XQ95_BRAFL	C3YD20_BRAFL	C3XQ95	C3YD20	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.511
C3XQ95_BRAFL	C3YJ52_BRAFL	C3XQ95	C3YJ52	Neuroblastoma RAS viral oncogene-like protein.	Phosphoinositide phospholipase C.	0.520
C3XQ95_BRAFL	C3YSL3_BRAFL	C3XQ95	C3YSL3	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.426
C3XQ95_BRAFL	C3YSL4_BRAFL	C3XQ95	C3YSL4	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.426
C3XQ95_BRAFL	C3Z3K0_BRAFL	C3XQ95	C3Z3K0	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.646
C3XQ95_BRAFL	C3ZAF6_BRAFL	C3XQ95	C3ZAF6	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.479
C3XQ95_BRAFL	C3ZMJ1_BRAFL	C3XQ95	C3ZMJ1	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.901
C3XQ95_BRAFL	C3ZV30_BRAFL	C3XQ95	C3ZV30	Neuroblastoma RAS viral oncogene-like protein.	Uncharacterized protein.	0.684
C3XQ95_BRAFL	C3ZV77_BRAFL	C3XQ95	C3ZV77	Neuroblastoma RAS viral oncogene-like protein.	Ras-GAP domain-containing protein.	0.632
C3XQ95_BRAFL	C3ZV81_BRAFL	C3XQ95	C3ZV81	Neuroblastoma RAS viral oncogene-like protein.	CRAL-TRIO domain-containing protein.	0.632
C3XQ95_BRAFL	C3ZWT9_BRAFL	C3XQ95	C3ZWT9	Neuroblastoma RAS viral oncogene-like protein.	PH domain-containing protein.	0.457
C3XQ95_BRAFL	C3ZWU3_BRAFL	C3XQ95	C3ZWU3	Neuroblastoma RAS viral oncogene-like protein.	Ras-GEF domain-containing protein.	0.457
C3XQ95_BRAFL	C3ZYH7_BRAFL	C3XQ95	C3ZYH7	Neuroblastoma RAS viral oncogene-like protein.	Ras-GEF domain-containing protein.	0.457
C3XR84_BRAFL	C3XZI5_BRAFL	C3XR84	C3XZI5	Uncharacterized protein.	Uncharacterized protein.	0.498
C3XR84_BRAFL	C3Y164_BRAFL	C3XR84	C3Y164	Uncharacterized protein.	Protein kinase domain-containing protein.	0.516
C3XR84_BRAFL	C3Y165_BRAFL	C3XR84	C3Y165	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.516
C3XR84_BRAFL	C3Y2K9_BRAFL	C3XR84	C3Y2K9	Uncharacterized protein.	Uncharacterized protein.	0.479