(15 nodes) Neuroblast proliferation network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XW39_BRAFL	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (163 aa)
	C3XWD3_BRAFL	Hedgehog interacting protein-like protein. (1788 aa)
	C3Y0G7_BRAFL	Fork-head domain-containing protein. (402 aa)
	C3Y0T5_BRAFL	PID domain-containing protein. (225 aa)
	C3Y0T6_BRAFL	NumbF domain-containing protein. (429 aa)
	C3Y4C7_BRAFL	Uncharacterized protein. (1023 aa)
	C3YH69_BRAFL	Uncharacterized protein. (2862 aa)
	C3YJD3_BRAFL	Lipase_3 domain-containing protein. (545 aa)
	C3YUN9_BRAFL	Lipase_3 domain-containing protein. (689 aa)
	C3Z4W8_BRAFL	Uncharacterized protein. (53 aa)
	C3ZRQ9_BRAFL	Uncharacterized protein. (856 aa)
	C3ZRR0_BRAFL	Uncharacterized protein. (218 aa)
	C3ZTW1_BRAFL	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1250 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XWD3_BRAFL	C3ZTW1_BRAFL	C3XWD3	C3ZTW1	Hedgehog interacting protein-like protein.	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.524
C3Y4C7_BRAFL	C3ZRQ9_BRAFL	C3Y4C7	C3ZRQ9	Uncharacterized protein.	Uncharacterized protein.	0.535
C3Y4C7_BRAFL	C3ZRR0_BRAFL	C3Y4C7	C3ZRR0	Uncharacterized protein.	Uncharacterized protein.	0.535
C3ZRQ9_BRAFL	C3Y4C7_BRAFL	C3ZRQ9	C3Y4C7	Uncharacterized protein.	Uncharacterized protein.	0.535
C3ZRQ9_BRAFL	C3ZRR0_BRAFL	C3ZRQ9	C3ZRR0	Uncharacterized protein.	Uncharacterized protein.	0.734
C3ZRR0_BRAFL	C3Y4C7_BRAFL	C3ZRR0	C3Y4C7	Uncharacterized protein.	Uncharacterized protein.	0.535
C3ZRR0_BRAFL	C3ZRQ9_BRAFL	C3ZRR0	C3ZRQ9	Uncharacterized protein.	Uncharacterized protein.	0.734
C3ZTW1_BRAFL	C3XWD3_BRAFL	C3ZTW1	C3XWD3	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Hedgehog interacting protein-like protein.	0.524
C3ZV77_BRAFL	C3ZV81_BRAFL	C3ZV77	C3ZV81	Ras-GAP domain-containing protein.	CRAL-TRIO domain-containing protein.	0.951
C3ZV81_BRAFL	C3ZV77_BRAFL	C3ZV81	C3ZV77	CRAL-TRIO domain-containing protein.	Ras-GAP domain-containing protein.	0.951