(19 nodes) Bile acid metabolic process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZZZ0_BRAFL	Uncharacterized protein. (525 aa)
	C3XY03_BRAFL	Uncharacterized protein. (665 aa)
	C3YIU7_BRAFL	Uncharacterized protein. (1125 aa)
	C3YPS7_BRAFL	Uncharacterized protein. (480 aa)
	C3YQL7_BRAFL	SCP2 domain-containing protein. (128 aa)
	C3Z2D4_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (1154 aa)
	C3Z2Q2_BRAFL	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
	C3Z332_BRAFL	Uncharacterized protein. (829 aa)
	C3Z661_BRAFL	Uncharacterized protein. (380 aa)
	C3Z6H1_BRAFL	Uncharacterized protein. (491 aa)
	C3Z6H2_BRAFL	NR LBD domain-containing protein. (121 aa)
	C3Z6H4_BRAFL	Uncharacterized protein. (320 aa)
	C3ZHD4_BRAFL	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (430 aa)
	C3ZHW4_BRAFL	Uncharacterized protein. (205 aa)
	C3ZLJ3_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (457 aa)
	C3ZVX5_BRAFL	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (540 aa)
	C3ZXV0_BRAFL	LRRNT domain-containing protein. (531 aa)
	C3ZZI9_BRAFL	Uncharacterized protein. (335 aa)
	C3ZZJ3_BRAFL	Uncharacterized protein. (314 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XY03_BRAFL	C3YQL7_BRAFL	C3XY03	C3YQL7	Uncharacterized protein.	SCP2 domain-containing protein.	0.632
C3XY03_BRAFL	C3ZVX5_BRAFL	C3XY03	C3ZVX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.632
C3YQL7_BRAFL	C3XY03_BRAFL	C3YQL7	C3XY03	SCP2 domain-containing protein.	Uncharacterized protein.	0.632
C3YQL7_BRAFL	C3Z661_BRAFL	C3YQL7	C3Z661	SCP2 domain-containing protein.	Uncharacterized protein.	0.596
C3YQL7_BRAFL	C3ZHD4_BRAFL	C3YQL7	C3ZHD4	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.701
C3YQL7_BRAFL	C3ZVX5_BRAFL	C3YQL7	C3ZVX5	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.770
C3Z2Q2_BRAFL	C3Z661_BRAFL	C3Z2Q2	C3Z661	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.438
C3Z2Q2_BRAFL	C3ZHD4_BRAFL	C3Z2Q2	C3ZHD4	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.951
C3Z661_BRAFL	C3YQL7_BRAFL	C3Z661	C3YQL7	Uncharacterized protein.	SCP2 domain-containing protein.	0.596
C3Z661_BRAFL	C3Z2Q2_BRAFL	C3Z661	C3Z2Q2	Uncharacterized protein.	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.438
C3Z661_BRAFL	C3ZHD4_BRAFL	C3Z661	C3ZHD4	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.634
C3Z661_BRAFL	C3ZVX5_BRAFL	C3Z661	C3ZVX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.596
C3ZHD4_BRAFL	C3YQL7_BRAFL	C3ZHD4	C3YQL7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	SCP2 domain-containing protein.	0.701
C3ZHD4_BRAFL	C3Z2Q2_BRAFL	C3ZHD4	C3Z2Q2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.951
C3ZHD4_BRAFL	C3Z661_BRAFL	C3ZHD4	C3Z661	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.634
C3ZHD4_BRAFL	C3ZVX5_BRAFL	C3ZHD4	C3ZVX5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.968
C3ZVX5_BRAFL	C3XY03_BRAFL	C3ZVX5	C3XY03	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.632
C3ZVX5_BRAFL	C3YQL7_BRAFL	C3ZVX5	C3YQL7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	SCP2 domain-containing protein.	0.770
C3ZVX5_BRAFL	C3Z661_BRAFL	C3ZVX5	C3Z661	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.596
C3ZVX5_BRAFL	C3ZHD4_BRAFL	C3ZVX5	C3ZHD4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.968