(17 nodes) Female gonad development network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z1V1_BRAFL	DNA_MISMATCH_REPAIR_2 domain-containing protein. (774 aa)
	C3YPQ7_BRAFL	Uncharacterized protein. (76 aa)
	C3YPQ9_BRAFL	Uncharacterized protein. (142 aa)
	C3YTF2_BRAFL	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (354 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YDQ8_BRAFL	Mothers against decapentaplegic homolog. (559 aa)
	C3Y9T6_BRAFL	TGF_BETA_2 domain-containing protein. (109 aa)
	C3Y243_BRAFL	SCAPER_N domain-containing protein. (1631 aa)
	C3Y062_BRAFL	Uncharacterized protein. (566 aa)
	C3XXN1_BRAFL	HECT domain-containing protein. (1032 aa)
	C3XUN8_BRAFL	W2 domain-containing protein. (673 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3ZHT7_BRAFL	Uncharacterized protein. (307 aa)
	C3YW20_BRAFL	TGF_BETA_2 domain-containing protein. (308 aa)
	C3ZNA0_BRAFL	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (447 aa)
	C3YW28_BRAFL	TGF_BETA_2 domain-containing protein. (400 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XUN8_BRAFL	C3YTF2_BRAFL	C3XUN8	C3YTF2	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
C3XUN8_BRAFL	C3ZNA0_BRAFL	C3XUN8	C3ZNA0	W2 domain-containing protein.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
C3Y9T6_BRAFL	C3YDQ8_BRAFL	C3Y9T6	C3YDQ8	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.515
C3YDQ8_BRAFL	C3Y9T6_BRAFL	C3YDQ8	C3Y9T6	Mothers against decapentaplegic homolog.	TGF_BETA_2 domain-containing protein.	0.515
C3YDQ8_BRAFL	C3YW20_BRAFL	C3YDQ8	C3YW20	Mothers against decapentaplegic homolog.	TGF_BETA_2 domain-containing protein.	0.515
C3YDQ8_BRAFL	C3YW28_BRAFL	C3YDQ8	C3YW28	Mothers against decapentaplegic homolog.	TGF_BETA_2 domain-containing protein.	0.515
C3YH71_BRAFL	C3YH73_BRAFL	C3YH71	C3YH73	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.948
C3YH71_BRAFL	C3YKX2_BRAFL	C3YH71	C3YKX2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Deacetylase sirtuin-type domain-containing protein.	0.430
C3YH71_BRAFL	C3Z1V1_BRAFL	C3YH71	C3Z1V1	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.541
C3YH73_BRAFL	C3YH71_BRAFL	C3YH73	C3YH71	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.948
C3YH73_BRAFL	C3YKX2_BRAFL	C3YH73	C3YKX2	FAT domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.430
C3YH73_BRAFL	C3Z1V1_BRAFL	C3YH73	C3Z1V1	FAT domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.541
C3YKX2_BRAFL	C3YH71_BRAFL	C3YKX2	C3YH71	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.430
C3YKX2_BRAFL	C3YH73_BRAFL	C3YKX2	C3YH73	Deacetylase sirtuin-type domain-containing protein.	FAT domain-containing protein.	0.430
C3YPQ7_BRAFL	C3YPQ9_BRAFL	C3YPQ7	C3YPQ9	Uncharacterized protein.	Uncharacterized protein.	0.540
C3YPQ9_BRAFL	C3YPQ7_BRAFL	C3YPQ9	C3YPQ7	Uncharacterized protein.	Uncharacterized protein.	0.540
C3YTF2_BRAFL	C3XUN8_BRAFL	C3YTF2	C3XUN8	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	W2 domain-containing protein.	0.999
C3YTF2_BRAFL	C3ZNA0_BRAFL	C3YTF2	C3ZNA0	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.	0.999
C3YW20_BRAFL	C3YDQ8_BRAFL	C3YW20	C3YDQ8	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.515
C3YW28_BRAFL	C3YDQ8_BRAFL	C3YW28	C3YDQ8	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.515