(65 nodes) Response to ionizing radiation network (Branchiostoma floridae)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	BABAM2	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...] (383 aa)
	C3XRL6_BRAFL	Uncharacterized protein. (299 aa)
	C3XT78_BRAFL	Uncharacterized protein. (458 aa)
	C3XTK2_BRAFL	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (905 aa)
	C3XU62_BRAFL	Uncharacterized protein. (1010 aa)
	C3XV97_BRAFL	Uncharacterized protein. (278 aa)
	C3XVD1_BRAFL	Uncharacterized protein. (3715 aa)
	C3XVP9_BRAFL	Uncharacterized protein. (312 aa)
	C3XY57_BRAFL	WD_REPEATS_REGION domain-containing protein. (397 aa)
	C3Y235_BRAFL	BHLH domain-containing protein. (369 aa)
	C3Y254_BRAFL	PWWP domain-containing protein. (437 aa)
	C3Y342_BRAFL	Uncharacterized protein. (584 aa)
	C3Y4F4_BRAFL	Uncharacterized protein. (676 aa)
	C3Y4R4_BRAFL	Helicase C-terminal domain-containing protein. (392 aa)
	C3Y4U9_BRAFL	Uncharacterized protein. (120 aa)
	C3Y696_BRAFL	Uncharacterized protein. (304 aa)
	C3Y6U5_BRAFL	Uncharacterized protein. (360 aa)
	C3Y6Y9_BRAFL	Uncharacterized protein. (861 aa)
	C3Y6Z8_BRAFL	Uncharacterized protein. (972 aa)
	C3Y8L9_BRAFL	Lysine--tRNA ligase. (593 aa)
	C3Y8N4_BRAFL	Helicase C-terminal domain-containing protein. (591 aa)
	C3Y8U7_BRAFL	Uncharacterized protein. (430 aa)
	C3Y8U9_BRAFL	Uncharacterized protein. (418 aa)
	C3Y937_BRAFL	Uncharacterized protein. (427 aa)
	C3YBF4_BRAFL	Uncharacterized protein. (2359 aa)
	C3YCM0_BRAFL	F-box domain-containing protein. (317 aa)
	C3YDS9_BRAFL	Uncharacterized protein. (326 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YJI7_BRAFL	Uncharacterized protein. (923 aa)
	C3YJQ0_BRAFL	MPN domain-containing protein. (268 aa)
	C3YKR1_BRAFL	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (666 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YNI7_BRAFL	Uncharacterized protein. (1175 aa)
	C3YT07_BRAFL	Uncharacterized protein. (302 aa)
	C3YTI8_BRAFL	Uncharacterized protein. (247 aa)
	C3YW39_BRAFL	Uncharacterized protein. (2614 aa)
	C3YX63_BRAFL	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (354 aa)
	C3YZ01_BRAFL	DNA ligase. (793 aa)
	C3YZM5_BRAFL	Uncharacterized protein. (453 aa)
	C3Z1F8_BRAFL	Ku domain-containing protein. (613 aa)
	C3Z1H3_BRAFL	Uncharacterized protein. (270 aa)
	C3Z1H4_BRAFL	Uncharacterized protein. (1738 aa)
	C3Z291_BRAFL	RING-type domain-containing protein. (668 aa)
	C3Z378_BRAFL	Metallophos domain-containing protein. (430 aa)
	C3Z388_BRAFL	Metallophos domain-containing protein. (425 aa)
	C3Z3A4_BRAFL	Uncharacterized protein. (676 aa)
	C3Z6I4_BRAFL	Uncharacterized protein. (107 aa)
	C3Z749_BRAFL	Uncharacterized protein. (1464 aa)
	C3Z9X0_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2531 aa)
	C3ZBQ9_BRAFL	Helicase ATP-binding domain-containing protein. (270 aa)
	C3ZEP2_BRAFL	Uncharacterized protein. (344 aa)
	C3ZET3_BRAFL	RING-type domain-containing protein. (121 aa)
	C3ZHI0_BRAFL	Helicase ATP-binding domain-containing protein. (504 aa)
	C3ZIZ9_BRAFL	Uncharacterized protein. (815 aa)
	C3ZKP7_BRAFL	Uncharacterized protein. (612 aa)
	C3ZLH8_BRAFL	Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
	C3ZMU1_BRAFL	Uncharacterized protein. (1878 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZR83_BRAFL	Uncharacterized protein. (459 aa)
	C3ZSM7_BRAFL	Ku domain-containing protein. (716 aa)
	C3ZTJ4_BRAFL	Uncharacterized protein. (502 aa)
	C3ZV28_BRAFL	Uncharacterized protein. (383 aa)
	C3ZXK7_BRAFL	Uncharacterized protein. (1911 aa)
	C3ZZH4_BRAFL	Uncharacterized protein. (541 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BABAM2	C3XRL6_BRAFL	B6NXD5	C3XRL6	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.543
BABAM2	C3Y4F4_BRAFL	B6NXD5	C3Y4F4	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.869
BABAM2	C3YBF4_BRAFL	B6NXD5	C3YBF4	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.465
BABAM2	C3YH71_BRAFL	B6NXD5	C3YH71	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.460
BABAM2	C3YH73_BRAFL	B6NXD5	C3YH73	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	FAT domain-containing protein.	0.460
BABAM2	C3YJQ0_BRAFL	B6NXD5	C3YJQ0	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	MPN domain-containing protein.	0.986
BABAM2	C3YT07_BRAFL	B6NXD5	C3YT07	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.963
BABAM2	C3YTI8_BRAFL	B6NXD5	C3YTI8	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.963
BABAM2	C3YW39_BRAFL	B6NXD5	C3YW39	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.897
BABAM2	C3ZET3_BRAFL	B6NXD5	C3ZET3	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	RING-type domain-containing protein.	0.484
BABAM2	C3ZV28_BRAFL	B6NXD5	C3ZV28	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	Uncharacterized protein.	0.495
C3XRL6_BRAFL	BABAM2	C3XRL6	B6NXD5	Uncharacterized protein.	BRISC and BRCA1-A complex member 2; Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes 'Lys-63'- linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integri [...]	0.543
C3XRL6_BRAFL	C3Y4F4_BRAFL	C3XRL6	C3Y4F4	Uncharacterized protein.	Uncharacterized protein.	0.869
C3XRL6_BRAFL	C3YBF4_BRAFL	C3XRL6	C3YBF4	Uncharacterized protein.	Uncharacterized protein.	0.465
C3XRL6_BRAFL	C3YH71_BRAFL	C3XRL6	C3YH71	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.460
C3XRL6_BRAFL	C3YH73_BRAFL	C3XRL6	C3YH73	Uncharacterized protein.	FAT domain-containing protein.	0.460
C3XRL6_BRAFL	C3YJQ0_BRAFL	C3XRL6	C3YJQ0	Uncharacterized protein.	MPN domain-containing protein.	0.986
C3XRL6_BRAFL	C3YT07_BRAFL	C3XRL6	C3YT07	Uncharacterized protein.	Uncharacterized protein.	0.963
C3XRL6_BRAFL	C3YTI8_BRAFL	C3XRL6	C3YTI8	Uncharacterized protein.	Uncharacterized protein.	0.963
C3XRL6_BRAFL	C3YW39_BRAFL	C3XRL6	C3YW39	Uncharacterized protein.	Uncharacterized protein.	0.897