STRINGSTRING
C3XPW3_BRAFL C3XPW3_BRAFL C3Y1U1_BRAFL C3Y1U1_BRAFL C3YC59_BRAFL C3YC59_BRAFL C3YC60_BRAFL C3YC60_BRAFL C3YC61_BRAFL C3YC61_BRAFL C3YC89_BRAFL C3YC89_BRAFL C3YC92_BRAFL C3YC92_BRAFL C3YP40_BRAFL C3YP40_BRAFL C3YUF0_BRAFL C3YUF0_BRAFL C3YXX8_BRAFL C3YXX8_BRAFL C3ZF68_BRAFL C3ZF68_BRAFL C3ZGU2_BRAFL C3ZGU2_BRAFL C3ZSW8_BRAFL C3ZSW8_BRAFL C3ZV77_BRAFL C3ZV77_BRAFL C3ZV81_BRAFL C3ZV81_BRAFL C3ZZD3_BRAFL C3ZZD3_BRAFL C4A017_BRAFL C4A017_BRAFL C4A0J1_BRAFL C4A0J1_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XPW3_BRAFLUncharacterized protein. (484 aa)
C3Y1U1_BRAFLAlkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (268 aa)
C3YC59_BRAFLLipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (187 aa)
C3YC60_BRAFLLipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (187 aa)
C3YC61_BRAFLLipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (188 aa)
C3YC89_BRAFLUncharacterized protein. (734 aa)
C3YC92_BRAFLUncharacterized protein. (440 aa)
C3YP40_BRAFLUncharacterized protein. (192 aa)
C3YUF0_BRAFLLipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (219 aa)
C3YXX8_BRAFLBCAS3 domain-containing protein. (825 aa)
C3ZF68_BRAFLLipocln_cytosolic_FA-bd_dom domain-containing protein. (190 aa)
C3ZGU2_BRAFLUncharacterized protein. (865 aa)
C3ZSW8_BRAFLRho-GAP domain-containing protein. (194 aa)
C3ZV77_BRAFLRas-GAP domain-containing protein. (1311 aa)
C3ZV81_BRAFLCRAL-TRIO domain-containing protein. (1389 aa)
C3ZZD3_BRAFLUncharacterized protein. (189 aa)
C4A017_BRAFLUncharacterized protein. (205 aa)
C4A0J1_BRAFLRho-GAP domain-containing protein. (114 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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