(62 nodes) Regulation of mitochondrion organization network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZRU7_BRAFL	Uncharacterized protein. (120 aa)
	C3ZSS9_BRAFL	Uncharacterized protein. (659 aa)
	C3ZST8_BRAFL	Uncharacterized protein. (647 aa)
	C3ZTP3_BRAFL	TMEM135_C_rich domain-containing protein. (633 aa)
	C3ZWB3_BRAFL	Uncharacterized protein. (214 aa)
	C3ZWB9_BRAFL	Uncharacterized protein; Belongs to the BI1 family. (334 aa)
	C3XXE7_BRAFL	Uncharacterized protein. (291 aa)
	TAUT	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (528 aa)
	C3XZS1_BRAFL	RING-CH-type domain-containing protein. (297 aa)
	C3Y0G1_BRAFL	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily. (420 aa)
	C3Y0I7_BRAFL	Uncharacterized protein. (490 aa)
	C3Y262_BRAFL	PHB domain-containing protein. (287 aa)
	C3Y3L9_BRAFL	PRELI/MSF1 domain-containing protein. (215 aa)
	C3Y3W0_BRAFL	Uncharacterized protein. (678 aa)
	Avp	Vasopressin-neurophysin protein. (167 aa)
	C3Y6B2_BRAFL	Uncharacterized protein. (1975 aa)
	C3Y909_BRAFL	Deacetylase sirtuin-type domain-containing protein. (399 aa)
	C3Y9K8_BRAFL	ANK_REP_REGION domain-containing protein. (133 aa)
	C3YCD9_BRAFL	Peptidase_M48 domain-containing protein. (473 aa)
	C3YCQ3_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (961 aa)
	C3YCT7_BRAFL	RING-CH-type domain-containing protein. (282 aa)
	C3YDA8_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (293 aa)
	C3YDJ4_BRAFL	RING-type domain-containing protein. (299 aa)
	C3YF93_BRAFL	Mab-21 domain-containing protein. (558 aa)
	C3YGH7_BRAFL	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (779 aa)
	C3YJ97_BRAFL	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (615 aa)
	C3YLJ2_BRAFL	HECT domain-containing protein. (1535 aa)
	C3YLJ3_BRAFL	Uncharacterized protein. (1297 aa)
	C3YLL9_BRAFL	Mab-21 domain-containing protein. (275 aa)
	C3YLM0_BRAFL	Mab-21 domain-containing protein. (326 aa)
	C3YLM1_BRAFL	Mab-21 domain-containing protein. (457 aa)
	C3YN24_BRAFL	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (889 aa)
	C3YR44_BRAFL	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (724 aa)
	C3YSM3_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (293 aa)
	C3YW54_BRAFL	PKS_ER domain-containing protein. (263 aa)
	C3YWJ6_BRAFL	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (96 aa)
	C3Z502_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
	C3Z7E2_BRAFL	UDENN FLCN/SMCR8-type domain-containing protein. (473 aa)
	C3Z7F4_BRAFL	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (186 aa)
	C3Z8X1_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	C3ZAE2_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (707 aa)
	C3ZDX0_BRAFL	Rhomboid domain-containing protein. (333 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZGM5_BRAFL	Uncharacterized protein. (132 aa)
	C3ZHT2_BRAFL	Uncharacterized protein. (281 aa)
	C3ZIC4_BRAFL	Rho-GAP domain-containing protein. (771 aa)
	C3ZJH9_BRAFL	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
	C3ZM59_BRAFL	Uncharacterized protein. (279 aa)
	C3ZQ44_BRAFL	Uncharacterized protein. (144 aa)
	C3ZQ45_BRAFL	Uncharacterized protein. (160 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZQG9_BRAFL	Uncharacterized protein. (387 aa)
	C3XPR1_BRAFL	Chorein_N domain-containing protein. (153 aa)
	C3XPR2_BRAFL	UBA domain-containing protein. (4212 aa)
	C3XPY9_BRAFL	Protein kinase domain-containing protein. (347 aa)
	C3XQC2_BRAFL	PI31_Prot_N domain-containing protein. (636 aa)
	C3XRP1_BRAFL	Uncharacterized protein. (1157 aa)
	C3XST6_BRAFL	Uncharacterized protein. (189 aa)
	C3XVR8_BRAFL	Uncharacterized protein. (330 aa)
	C3XVS8_BRAFL	Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (522 aa)
	C3XVY8_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPY9_BRAFL	C3XQC2_BRAFL	C3XPY9	C3XQC2	Protein kinase domain-containing protein.	PI31_Prot_N domain-containing protein.	0.736
C3XPY9_BRAFL	C3XRP1_BRAFL	C3XPY9	C3XRP1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.579
C3XPY9_BRAFL	C3XVY8_BRAFL	C3XPY9	C3XVY8	Protein kinase domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.971
C3XPY9_BRAFL	C3Y9K8_BRAFL	C3XPY9	C3Y9K8	Protein kinase domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.499
C3XPY9_BRAFL	C3YGH7_BRAFL	C3XPY9	C3YGH7	Protein kinase domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.711
C3XPY9_BRAFL	C3YJ97_BRAFL	C3XPY9	C3YJ97	Protein kinase domain-containing protein.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.579
C3XPY9_BRAFL	C3YN24_BRAFL	C3XPY9	C3YN24	Protein kinase domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.722
C3XPY9_BRAFL	C3YR44_BRAFL	C3XPY9	C3YR44	Protein kinase domain-containing protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.722
C3XPY9_BRAFL	C3Z502_BRAFL	C3XPY9	C3Z502	Protein kinase domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.997
C3XPY9_BRAFL	C3ZAE2_BRAFL	C3XPY9	C3ZAE2	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.749
C3XPY9_BRAFL	C3ZDX0_BRAFL	C3XPY9	C3ZDX0	Protein kinase domain-containing protein.	Rhomboid domain-containing protein.	0.731
C3XPY9_BRAFL	C3ZHT2_BRAFL	C3XPY9	C3ZHT2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.709
C3XPY9_BRAFL	C3ZJH9_BRAFL	C3XPY9	C3ZJH9	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.537
C3XQC2_BRAFL	C3XPY9_BRAFL	C3XQC2	C3XPY9	PI31_Prot_N domain-containing protein.	Protein kinase domain-containing protein.	0.736
C3XQC2_BRAFL	C3Y9K8_BRAFL	C3XQC2	C3Y9K8	PI31_Prot_N domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.538
C3XQC2_BRAFL	C3YGH7_BRAFL	C3XQC2	C3YGH7	PI31_Prot_N domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.523
C3XRP1_BRAFL	C3XPY9_BRAFL	C3XRP1	C3XPY9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.579
C3XRP1_BRAFL	C3XVY8_BRAFL	C3XRP1	C3XVY8	Uncharacterized protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.528
C3XRP1_BRAFL	C3YCQ3_BRAFL	C3XRP1	C3YCQ3	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.606
C3XRP1_BRAFL	C3YDJ4_BRAFL	C3XRP1	C3YDJ4	Uncharacterized protein.	RING-type domain-containing protein.	0.531