(25 nodes) Cellular component assembly involved in morphogenesis network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y675_BRAFL	Tetraspanin. (264 aa)
	C3XQV4_BRAFL	PlsC domain-containing protein. (538 aa)
	C3XU08_BRAFL	Rab-GAP TBC domain-containing protein. (404 aa)
	C3XYX8_BRAFL	Uncharacterized protein. (1404 aa)
	C3XYZ3_BRAFL	MADS-box domain-containing protein. (534 aa)
	C3Y0H1_BRAFL	Helicase ATP-binding domain-containing protein. (763 aa)
	C3Y5N8_BRAFL	HMG box domain-containing protein. (472 aa)
	C3Y5Z1_BRAFL	Tetraspanin. (253 aa)
	C3Y7I0_BRAFL	Uncharacterized protein. (651 aa)
	C3YE95_BRAFL	Uncharacterized protein. (188 aa)
	C3YF92_BRAFL	Uncharacterized protein. (1253 aa)
	C3YI49_BRAFL	SAC domain-containing protein. (888 aa)
	C3YJ60_BRAFL	WD_REPEATS_REGION domain-containing protein. (534 aa)
	C3YYJ0_BRAFL	Uncharacterized protein. (2116 aa)
	C3Z0C7_BRAFL	Ig-like domain-containing protein. (101 aa)
	C3Z0E4_BRAFL	Uncharacterized protein. (2185 aa)
	C3Z2D3_BRAFL	Uncharacterized protein. (1856 aa)
	C3Z3N5_BRAFL	Spc7 domain-containing protein. (1713 aa)
	C3Z588_BRAFL	Uncharacterized protein. (1024 aa)
	C3ZCV2_BRAFL	Uncharacterized protein. (205 aa)
	C3ZEZ9_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (291 aa)
	C3ZH64_BRAFL	LIM zinc-binding domain-containing protein. (8974 aa)
	C3ZK45_BRAFL	Uncharacterized protein. (208 aa)
	C3ZMJ8_BRAFL	Uncharacterized protein. (179 aa)
	C3ZQS8_BRAFL	Uncharacterized protein. (4293 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0H1_BRAFL	C3Z3N5_BRAFL	C3Y0H1	C3Z3N5	Helicase ATP-binding domain-containing protein.	Spc7 domain-containing protein.	0.506
C3Y0H1_BRAFL	C3ZCV2_BRAFL	C3Y0H1	C3ZCV2	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.947
C3Y7I0_BRAFL	C3ZH64_BRAFL	C3Y7I0	C3ZH64	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.571
C3YI49_BRAFL	C3YYJ0_BRAFL	C3YI49	C3YYJ0	SAC domain-containing protein.	Uncharacterized protein.	0.998
C3YYJ0_BRAFL	C3YI49_BRAFL	C3YYJ0	C3YI49	Uncharacterized protein.	SAC domain-containing protein.	0.998
C3Z3N5_BRAFL	C3Y0H1_BRAFL	C3Z3N5	C3Y0H1	Spc7 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.506
C3ZCV2_BRAFL	C3Y0H1_BRAFL	C3ZCV2	C3Y0H1	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.947
C3ZH64_BRAFL	C3Y7I0_BRAFL	C3ZH64	C3Y7I0	LIM zinc-binding domain-containing protein.	Uncharacterized protein.	0.571
C3ZH64_BRAFL	C3ZMJ8_BRAFL	C3ZH64	C3ZMJ8	LIM zinc-binding domain-containing protein.	Uncharacterized protein.	0.571
C3ZMJ8_BRAFL	C3ZH64_BRAFL	C3ZMJ8	C3ZH64	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.571