(89 nodes) Transport along microtubule network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YN60_BRAFL	GOLD domain-containing protein. (128 aa)
	C3YN61_BRAFL	RUN domain-containing protein. (113 aa)
	C3YN80_BRAFL	Uncharacterized protein. (996 aa)
	C3ZBS4_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (718 aa)
	C3Z8L6_BRAFL	Uncharacterized protein. (126 aa)
	C3Z7W1_BRAFL	Uncharacterized protein. (434 aa)
	C3Z7W0_BRAFL	Uncharacterized protein. (210 aa)
	C3Z6R3_BRAFL	NUDE_C domain-containing protein. (366 aa)
	C3ZGK1_BRAFL	WD_REPEATS_REGION domain-containing protein. (432 aa)
	C3XPG2_BRAFL	Uncharacterized protein. (262 aa)
	C3XQJ3_BRAFL	Uncharacterized protein. (506 aa)
	C3XRA0_BRAFL	Uncharacterized protein; Belongs to the actin family. (448 aa)
	C3XRA6_BRAFL	Uncharacterized protein. (226 aa)
	C3XRP1_BRAFL	Uncharacterized protein. (1157 aa)
	LIS1_BRAFL	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (406 aa)
	C3YHZ5_BRAFL	Uncharacterized protein. (585 aa)
	C3YHX7_BRAFL	Uncharacterized protein. (388 aa)
	C3Z511_BRAFL	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (416 aa)
	C3Z3W6_BRAFL	Uncharacterized protein. (376 aa)
	C3Z0T8_BRAFL	WD_REPEATS_REGION domain-containing protein. (1351 aa)
	C3YZZ0_BRAFL	Uncharacterized protein. (349 aa)
	C3YYW6_BRAFL	Uncharacterized protein. (699 aa)
	C3YXG0_BRAFL	Uncharacterized protein. (126 aa)
	C3YX83_BRAFL	Lebercilin domain-containing protein. (220 aa)
	C3YX78_BRAFL	Lebercilin domain-containing protein. (220 aa)
	C3YW24_BRAFL	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (798 aa)
	C3YV71_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	C3YV44_BRAFL	WD_REPEATS_REGION domain-containing protein. (1189 aa)
	C3YUK3_BRAFL	Uncharacterized protein. (2125 aa)
	C3YUI5_BRAFL	Adaptin_N domain-containing protein. (239 aa)
	C3YUI3_BRAFL	Uncharacterized protein. (564 aa)
	C3YUH2_BRAFL	Uncharacterized protein. (591 aa)
	C3YTX2_BRAFL	Uncharacterized protein. (122 aa)
	C3YTN9_BRAFL	Uncharacterized protein. (128 aa)
	C3YTL9_BRAFL	Uncharacterized protein. (125 aa)
	C3YHX4_BRAFL	Uncharacterized protein. (584 aa)
	C3YNA7_BRAFL	Battenin. (404 aa)
	C3YHX2_BRAFL	Uncharacterized protein. (582 aa)
	C3YGK1_BRAFL	Uncharacterized protein. (410 aa)
	C3YEX7_BRAFL	Uncharacterized protein. (222 aa)
	C3YDN0_BRAFL	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis. (125 aa)
	C3YCD6_BRAFL	Uncharacterized protein. (554 aa)
	C3YBJ9_BRAFL	Uncharacterized protein. (827 aa)
	C3YA29_BRAFL	WD_REPEATS_REGION domain-containing protein. (616 aa)
	C3Y9Y7_BRAFL	Uncharacterized protein. (556 aa)
	C3Y9G8_BRAFL	WD_REPEATS_REGION domain-containing protein. (1402 aa)
	C3Y953_BRAFL	SUN domain-containing protein. (1111 aa)
	C3Y7G6_BRAFL	Uncharacterized protein. (184 aa)
	C3Y7G4_BRAFL	Uncharacterized protein. (160 aa)
	C4A0I4_BRAFL	Battenin. (336 aa)
	C4A096_BRAFL	Uncharacterized protein. (200 aa)
	C3ZZP6_BRAFL	Uncharacterized protein. (68 aa)
	C3ZXB4_BRAFL	Uncharacterized protein. (234 aa)
	C3ZWH1_BRAFL	Uncharacterized protein. (99 aa)
	Smo2	Uncharacterized protein. (376 aa)
	C3ZTT9_BRAFL	Uncharacterized protein. (2524 aa)
	C3ZTT8_BRAFL	Uncharacterized protein. (1290 aa)
	C3ZRY4_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)
	C3ZRU4_BRAFL	Uncharacterized protein. (187 aa)
	C3ZRS7_BRAFL	Uncharacterized protein. (159 aa)
	C3ZQ21_BRAFL	HTH myb-type domain-containing protein. (55 aa)
	C3ZLU3_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (381 aa)
	C3ZLN4_BRAFL	DUF3694 domain-containing protein. (926 aa)
	C3ZLN3_BRAFL	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1038 aa)
	C3ZLF9_BRAFL	Uncharacterized protein. (710 aa)
	C3ZKY9_BRAFL	Uncharacterized protein. (733 aa)
	C3ZIK4_BRAFL	Pex14_N domain-containing protein. (358 aa)
	C3ZIA2_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (506 aa)
	C3ZHU7_BRAFL	Uncharacterized protein. (132 aa)
	C3YID6_BRAFL	Uncharacterized protein. (138 aa)
	C3YIE0_BRAFL	Adaptin_N domain-containing protein. (1179 aa)
	C3YJ97_BRAFL	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (615 aa)
	C3YKC6_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (810 aa)
	C3YLJ7_BRAFL	Uncharacterized protein. (785 aa)
	C3YML7_BRAFL	Uncharacterized protein. (155 aa)
	C3YMT5_BRAFL	ANAPC4_WD40 domain-containing protein. (1063 aa)
	C3YN37_BRAFL	Uncharacterized protein. (1290 aa)
	C3Y3A6_BRAFL	Uncharacterized protein. (618 aa)
	C3Y292_BRAFL	Uncharacterized protein. (440 aa)
	C3Y1R0_BRAFL	Spatacsin_C domain-containing protein. (1876 aa)
	C3XWD2_BRAFL	PCM1_C domain-containing protein. (1969 aa)
	Barx1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (955 aa)
	C3Y1Q0_BRAFL	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1065 aa)
	C3Z6C2_BRAFL	Uncharacterized protein. (90 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3YI17_BRAFL	Uncharacterized protein. (819 aa)
	C3ZCW1_BRAFL	WD_REPEATS_REGION domain-containing protein. (1683 aa)
	C3ZBY4_BRAFL	AAA domain-containing protein. (663 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Barx1	C3YKC6_BRAFL	C3XZC7	C3YKC6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.563
Barx1	C3YW24_BRAFL	C3XZC7	C3YW24	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.574
Barx1	C3Z6R3_BRAFL	C3XZC7	C3Z6R3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	NUDE_C domain-containing protein.	0.594
Barx1	C3ZBS4_BRAFL	C3XZC7	C3ZBS4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.557
Barx1	C3ZLN3_BRAFL	C3XZC7	C3ZLN3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.540
Barx1	C3ZLN4_BRAFL	C3XZC7	C3ZLN4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	DUF3694 domain-containing protein.	0.895
Barx1	C3ZLU3_BRAFL	C3XZC7	C3ZLU3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.673
C3XPG2_BRAFL	C3XQJ3_BRAFL	C3XPG2	C3XQJ3	Uncharacterized protein.	Uncharacterized protein.	0.970
C3XPG2_BRAFL	C3XRA6_BRAFL	C3XPG2	C3XRA6	Uncharacterized protein.	Uncharacterized protein.	0.850
C3XPG2_BRAFL	C3Y292_BRAFL	C3XPG2	C3Y292	Uncharacterized protein.	Uncharacterized protein.	0.989
C3XPG2_BRAFL	C3Y9G8_BRAFL	C3XPG2	C3Y9G8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.908
C3XPG2_BRAFL	C3Y9Y7_BRAFL	C3XPG2	C3Y9Y7	Uncharacterized protein.	Uncharacterized protein.	0.974
C3XPG2_BRAFL	C3YGK1_BRAFL	C3XPG2	C3YGK1	Uncharacterized protein.	Uncharacterized protein.	0.972
C3XPG2_BRAFL	C3YI17_BRAFL	C3XPG2	C3YI17	Uncharacterized protein.	Uncharacterized protein.	0.944
C3XPG2_BRAFL	C3YID6_BRAFL	C3XPG2	C3YID6	Uncharacterized protein.	Uncharacterized protein.	0.962
C3XPG2_BRAFL	C3YMT5_BRAFL	C3XPG2	C3YMT5	Uncharacterized protein.	ANAPC4_WD40 domain-containing protein.	0.891
C3XPG2_BRAFL	C3YN37_BRAFL	C3XPG2	C3YN37	Uncharacterized protein.	Uncharacterized protein.	0.895
C3XPG2_BRAFL	C3YTX2_BRAFL	C3XPG2	C3YTX2	Uncharacterized protein.	Uncharacterized protein.	0.409
C3XPG2_BRAFL	C3YV44_BRAFL	C3XPG2	C3YV44	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.939
C3XPG2_BRAFL	C3YXG0_BRAFL	C3XPG2	C3YXG0	Uncharacterized protein.	Uncharacterized protein.	0.409