(13 nodes) Nucleotide transmembrane transporter activity network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZS24_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)
	C3ZTE8_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (470 aa)
	C3ZSN2_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	C3XYI5_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (325 aa)
	C3XZ67_BRAFL	Uncharacterized protein. (425 aa)
	C3Y1Y5_BRAFL	Uncharacterized protein. (383 aa)
	C3Y9L7_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (326 aa)
	C3YDA8_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (293 aa)
	C3YDW4_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	C3YDX0_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	C3YSM3_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (293 aa)
	C3Z8X1_BRAFL	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	C3ZLN8_BRAFL	Uncharacterized protein. (492 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XYI5_BRAFL	C3ZSN2_BRAFL	C3XYI5	C3ZSN2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.429
C3ZS24_BRAFL	C3ZSN2_BRAFL	C3ZS24	C3ZSN2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.442
C3ZSN2_BRAFL	C3XYI5_BRAFL	C3ZSN2	C3XYI5	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.429
C3ZSN2_BRAFL	C3ZS24_BRAFL	C3ZSN2	C3ZS24	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.442