(126 nodes) Vesicle organization network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZQP7_BRAFL	PXA domain-containing protein. (154 aa)
	C4A0W4_BRAFL	Uncharacterized protein. (99 aa)
	C4A0I4_BRAFL	Battenin. (336 aa)
	C4A096_BRAFL	Uncharacterized protein. (200 aa)
	C3ZZF0_BRAFL	J domain-containing protein. (2013 aa)
	C3ZZE9_BRAFL	Uncharacterized protein. (220 aa)
	C3ZYQ6_BRAFL	RING-type domain-containing protein. (316 aa)
	C3ZYE4_BRAFL	MIT domain-containing protein. (115 aa)
	C3ZXB4_BRAFL	Uncharacterized protein. (234 aa)
	C3ZUU8_BRAFL	RING-type domain-containing protein. (212 aa)
	C3ZSM9_BRAFL	Uncharacterized protein. (162 aa)
	C3ZRS7_BRAFL	Uncharacterized protein. (159 aa)
	C3ZRD8_BRAFL	Uncharacterized protein. (330 aa)
	C3ZQS8_BRAFL	Uncharacterized protein. (4293 aa)
	C3ZP65_BRAFL	V-SNARE coiled-coil homology domain-containing protein. (114 aa)
	C3ZLU5_BRAFL	PH domain-containing protein. (629 aa)
	C3ZLP3_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (589 aa)
	C3ZK90_BRAFL	Uncharacterized protein. (274 aa)
	C3ZJ54_BRAFL	Uncharacterized protein. (410 aa)
	C3ZH69_BRAFL	PX domain-containing protein. (295 aa)
	C3ZGI7_BRAFL	Death domain-containing protein. (463 aa)
	C3ZG74_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	C3ZE24_BRAFL	Uncharacterized protein. (303 aa)
	C3ZDY2_BRAFL	CULLIN_2 domain-containing protein; Belongs to the cullin family. (753 aa)
	C3ZCW7_BRAFL	WD_REPEATS_REGION domain-containing protein. (393 aa)
	C3ZCV2_BRAFL	Uncharacterized protein. (205 aa)
	C3ZCV0_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (253 aa)
	C3ZCC0_BRAFL	Uncharacterized protein. (333 aa)
	C3ZAU4_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (318 aa)
	C3Z9D6_BRAFL	Uncharacterized protein. (185 aa)
	C3Z904_BRAFL	Uncharacterized protein. (205 aa)
	C3Z6X5_BRAFL	Uncharacterized protein. (184 aa)
	C3Z6K0_BRAFL	Uncharacterized protein. (269 aa)
	C3Z6E4_BRAFL	Uncharacterized protein. (1203 aa)
	C3Z6B6_BRAFL	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (387 aa)
	C3Z642_BRAFL	Sec7_N domain-containing protein. (553 aa)
	C3Z641_BRAFL	Uncharacterized protein. (66 aa)
	C3Z622_BRAFL	Uncharacterized protein. (334 aa)
	C3Z621_BRAFL	Uncharacterized protein. (409 aa)
	C3Z5P8_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (196 aa)
	C3Z532_BRAFL	Uncharacterized protein. (91 aa)
	C3Z4T4_BRAFL	Uncharacterized protein. (340 aa)
	C3Z3N5_BRAFL	Spc7 domain-containing protein. (1713 aa)
	C3Z367_BRAFL	Uncharacterized protein. (885 aa)
	C3Z328_BRAFL	Uncharacterized protein. (287 aa)
	C3Z319_BRAFL	Uncharacterized protein. (118 aa)
	C3Z318_BRAFL	Uncharacterized protein. (128 aa)
	C3Z089_BRAFL	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (211 aa)
	C3YZU7_BRAFL	Uncharacterized protein. (262 aa)
	C3YZ87_BRAFL	Uncharacterized protein. (234 aa)
	C3YYJ0_BRAFL	Uncharacterized protein. (2116 aa)
	C3YXX2_BRAFL	Uncharacterized protein. (310 aa)
	C3YXU9_BRAFL	ENTH domain-containing protein. (623 aa)
	C3YWT1_BRAFL	Uncharacterized protein. (185 aa)
	C3YVL3_BRAFL	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (318 aa)
	C3YV50_BRAFL	Uncharacterized protein. (208 aa)
	C3YUH8_BRAFL	WASH-7_N domain-containing protein. (184 aa)
	C3YUG4_BRAFL	Uncharacterized protein. (1144 aa)
	C3YU04_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (226 aa)
	C3YU03_BRAFL	Protein transport protein sec16. (2645 aa)
	C3YTZ4_BRAFL	Uncharacterized protein. (541 aa)
	C3YTN9_BRAFL	Uncharacterized protein. (128 aa)
	C3YSJ1_BRAFL	Uncharacterized protein. (1454 aa)
	C3YRU5_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	C3YPZ4_BRAFL	C2 domain-containing protein. (262 aa)
	C3YP64_BRAFL	Uncharacterized protein. (108 aa)
	C3YP49_BRAFL	Uncharacterized protein. (552 aa)
	C3YP48_BRAFL	Uncharacterized protein. (483 aa)
	C3YP47_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (552 aa)
	C3YP46_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (183 aa)
	C3YP45_BRAFL	Uncharacterized protein. (1159 aa)
	C3YP19_BRAFL	Uso1_p115_head domain-containing protein. (618 aa)
	C3YNA7_BRAFL	Battenin. (404 aa)
	C3YLC7_BRAFL	UBIQUITIN_CONJUGAT_2 domain-containing protein. (263 aa)
	C3YL72_BRAFL	WD_REPEATS_REGION domain-containing protein. (1113 aa)
	C3YKX3_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (206 aa)
	C3YKV1_BRAFL	RING-type domain-containing protein. (894 aa)
	C3YK76_BRAFL	YqaJ domain-containing protein. (264 aa)
	C3YJA1_BRAFL	Uncharacterized protein. (274 aa)
	C3YIE0_BRAFL	Adaptin_N domain-containing protein. (1179 aa)
	C3YID0_BRAFL	Uncharacterized protein. (446 aa)
	C3YHW5_BRAFL	Uncharacterized protein. (222 aa)
	C3YH60_BRAFL	Uncharacterized protein. (238 aa)
	C3YH01_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (331 aa)
	C3YEX7_BRAFL	Uncharacterized protein. (222 aa)
	C3YEV2_BRAFL	Uncharacterized protein. (288 aa)
	C3YEH0_BRAFL	Uncharacterized protein; Belongs to the AAA ATPase family. (440 aa)
	C3YC85_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (217 aa)
	C3YAV7_BRAFL	VPS10 domain-containing protein. (246 aa)
	C3YA80_BRAFL	Uncharacterized protein. (144 aa)
	C3YA03_BRAFL	Tyrosinase_Cu-bd domain-containing protein. (548 aa)
	C3YA02_BRAFL	Tyrosinase_Cu-bd domain-containing protein. (555 aa)
	C3Y8H3_BRAFL	Uncharacterized protein. (180 aa)
	C3Y7J3_BRAFL	FYVE-type domain-containing protein. (186 aa)
	C3Y6U6_BRAFL	MHD2 domain-containing protein. (1621 aa)
	C3Y5V4_BRAFL	Uncharacterized protein. (686 aa)
	C3Y5U4_BRAFL	Uncharacterized protein. (1422 aa)
	C3Y5N8_BRAFL	HMG box domain-containing protein. (472 aa)
	C3Y4I4_BRAFL	Uncharacterized protein. (333 aa)
	C3Y4G5_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (109 aa)
	C3Y4D1_BRAFL	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (804 aa)
	C3Y4A5_BRAFL	PI3K/PI4K domain-containing protein. (435 aa)
	C3Y345_BRAFL	RING-type domain-containing protein. (582 aa)
	C3Y1R0_BRAFL	Spatacsin_C domain-containing protein. (1876 aa)
	C3Y1Q0_BRAFL	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1065 aa)
	C3Y1N3_BRAFL	Uncharacterized protein. (283 aa)
	C3Y1H4_BRAFL	Uncharacterized protein. (1156 aa)
	C3Y1H2_BRAFL	Uncharacterized protein. (1144 aa)
	C3Y1H1_BRAFL	C2 domain-containing protein. (138 aa)
	C3XZL6_BRAFL	Uncharacterized protein. (300 aa)
	C3XZI6_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (239 aa)
	C3XZI4_BRAFL	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (782 aa)
	C3XXW5_BRAFL	PH domain-containing protein. (152 aa)
	C3XXM3_BRAFL	Pep3_Vps18 domain-containing protein. (986 aa)
	C3XXF8_BRAFL	Uncharacterized protein. (554 aa)
	C3XVZ5_BRAFL	CNH domain-containing protein. (863 aa)
	C3XVK8_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (210 aa)
	C3XVK7_BRAFL	Uncharacterized protein. (114 aa)
	C3XVI7_BRAFL	PH domain-containing protein. (134 aa)
	C3XUW5_BRAFL	PB1 domain-containing protein. (416 aa)
	C3XU08_BRAFL	Rab-GAP TBC domain-containing protein. (404 aa)
	C3XTX1_BRAFL	Uncharacterized protein. (182 aa)
	C3XTU6_BRAFL	Uncharacterized protein. (211 aa)
	C3XS11_BRAFL	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (194 aa)
	C3XS03_BRAFL	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (210 aa)
	C3XQ82_BRAFL	V-SNARE coiled-coil homology domain-containing protein. (125 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQ82_BRAFL	C3XS03_BRAFL	C3XQ82	C3XS03	V-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.984
C3XQ82_BRAFL	C3XS11_BRAFL	C3XQ82	C3XS11	V-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.984
C3XQ82_BRAFL	C3XVK7_BRAFL	C3XQ82	C3XVK7	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.996
C3XQ82_BRAFL	C3XVK8_BRAFL	C3XQ82	C3XVK8	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.996
C3XQ82_BRAFL	C3XVZ5_BRAFL	C3XQ82	C3XVZ5	V-SNARE coiled-coil homology domain-containing protein.	CNH domain-containing protein.	0.570
C3XQ82_BRAFL	C3XZI6_BRAFL	C3XQ82	C3XZI6	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.942
C3XQ82_BRAFL	C3Y1H1_BRAFL	C3XQ82	C3Y1H1	V-SNARE coiled-coil homology domain-containing protein.	C2 domain-containing protein.	0.689
C3XQ82_BRAFL	C3Y1H2_BRAFL	C3XQ82	C3Y1H2	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.690
C3XQ82_BRAFL	C3Y1N3_BRAFL	C3XQ82	C3Y1N3	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.753
C3XQ82_BRAFL	C3Y1Q0_BRAFL	C3XQ82	C3Y1Q0	V-SNARE coiled-coil homology domain-containing protein.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.675
C3XQ82_BRAFL	C3Y4D1_BRAFL	C3XQ82	C3Y4D1	V-SNARE coiled-coil homology domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.591
C3XQ82_BRAFL	C3Y4G5_BRAFL	C3XQ82	C3Y4G5	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.912
C3XQ82_BRAFL	C3Y4I4_BRAFL	C3XQ82	C3Y4I4	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.557
C3XQ82_BRAFL	C3Y6U6_BRAFL	C3XQ82	C3Y6U6	V-SNARE coiled-coil homology domain-containing protein.	MHD2 domain-containing protein.	0.508
C3XQ82_BRAFL	C3YAV7_BRAFL	C3XQ82	C3YAV7	V-SNARE coiled-coil homology domain-containing protein.	VPS10 domain-containing protein.	0.599
C3XQ82_BRAFL	C3YC85_BRAFL	C3XQ82	C3YC85	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.944
C3XQ82_BRAFL	C3YEV2_BRAFL	C3XQ82	C3YEV2	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.797
C3XQ82_BRAFL	C3YH01_BRAFL	C3XQ82	C3YH01	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.974
C3XQ82_BRAFL	C3YH60_BRAFL	C3XQ82	C3YH60	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.876
C3XQ82_BRAFL	C3YIE0_BRAFL	C3XQ82	C3YIE0	V-SNARE coiled-coil homology domain-containing protein.	Adaptin_N domain-containing protein.	0.466