(69 nodes) Carbohydrate biosynthetic process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y9N4_BRAFL	WSC domain-containing protein. (918 aa)
	C3YBS4_BRAFL	Uncharacterized protein. (317 aa)
	C3YBS5_BRAFL	PKS_ER domain-containing protein. (278 aa)
	C3YBS6_BRAFL	ADH_zinc_N domain-containing protein. (238 aa)
	C3YCQ7_BRAFL	Uncharacterized protein. (310 aa)
	C3YF89_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (390 aa)
	C3YFU1_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (510 aa)
	C3YID9_BRAFL	Uncharacterized protein. (1932 aa)
	C3YIV5_BRAFL	Aminotran_1_2 domain-containing protein. (412 aa)
	C3YJ26_BRAFL	AFP-like domain-containing protein. (351 aa)
	C3YJ27_BRAFL	NeuB domain-containing protein. (364 aa)
	C3YKH1_BRAFL	Carbohydrate sulfotransferase. (337 aa)
	C3YNE3_BRAFL	SGL domain-containing protein. (286 aa)
	C3YNL5_BRAFL	FAD-binding PCMH-type domain-containing protein. (415 aa)
	C3YRN2_BRAFL	Uncharacterized protein. (305 aa)
	C3YUK6_BRAFL	Uncharacterized protein. (381 aa)
	C3YV81_BRAFL	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (525 aa)
	C3YXK7_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (436 aa)
	C3YYV7_BRAFL	Glyco_transf_20 domain-containing protein. (488 aa)
	C3YZB9_BRAFL	Carbohydrate sulfotransferase. (225 aa)
	C3Z103_BRAFL	Inositol-1-monophosphatase. (274 aa)
	C3Z105_BRAFL	Inositol-1-monophosphatase. (284 aa)
	C3Z2Z0_BRAFL	Carbohydrate sulfotransferase. (376 aa)
	C3Z3P7_BRAFL	MFS domain-containing protein. (275 aa)
	C3Z3T4_BRAFL	PPC domain-containing protein. (148 aa)
	C3Z3T5_BRAFL	PPC domain-containing protein. (148 aa)
	C3Z482_BRAFL	Malate dehydrogenase. (340 aa)
	C3Z4S2_BRAFL	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1142 aa)
	C3Z5S9_BRAFL	Aamy domain-containing protein. (669 aa)
	C3Z6E5_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (386 aa)
	C3Z920_BRAFL	Inositol-1-monophosphatase. (268 aa)
	C3Z9M9_BRAFL	acidPPc domain-containing protein. (361 aa)
	C3ZAU8_BRAFL	Uncharacterized protein. (623 aa)
	C3ZBX8_BRAFL	Glucose-6-phosphate isomerase; Belongs to the GPI family. (557 aa)
	C3ZE63_BRAFL	CBM20 domain-containing protein. (316 aa)
	C3ZE78_BRAFL	Uncharacterized protein. (244 aa)
	C3ZGI4_BRAFL	Carbohydrate sulfotransferase. (224 aa)
	C3ZHI9_BRAFL	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (142 aa)
	C3ZI45_BRAFL	FAD-binding PCMH-type domain-containing protein. (462 aa)
	C3ZKB8_BRAFL	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (806 aa)
	C3ZLC3_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (456 aa)
	C3Y0B9_BRAFL	Uncharacterized protein. (229 aa)
	C3ZNB3_BRAFL	Uncharacterized protein. (539 aa)
	C3ZNB5_BRAFL	Uncharacterized protein. (621 aa)
	C3ZPF5_BRAFL	Uncharacterized protein. (304 aa)
	C3ZWX3_BRAFL	Uncharacterized protein. (501 aa)
	C3ZWY6_BRAFL	Uncharacterized protein. (564 aa)
	C3ZWY7_BRAFL	Uncharacterized protein. (563 aa)
	C3XYH6_BRAFL	Triosephosphate isomerase. (251 aa)
	C3XX82_BRAFL	Carbohydrate sulfotransferase. (266 aa)
	C3XWD1_BRAFL	SGL domain-containing protein. (297 aa)
	Hip1	SGL domain-containing protein. (304 aa)
	C3XWC9_BRAFL	SGL domain-containing protein. (289 aa)
	C3XWC8_BRAFL	Uncharacterized protein. (225 aa)
	C3XW30_BRAFL	Phosphoglycerate kinase. (415 aa)
	C3XRT4_BRAFL	RmlD_sub_bind domain-containing protein. (493 aa)
	C3XPZ3_BRAFL	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (485 aa)
	C3ZWY8_BRAFL	Uncharacterized protein. (563 aa)
	C4A0L0_BRAFL	Uncharacterized protein. (418 aa)
	C4A0L1_BRAFL	Uncharacterized protein. (332 aa)
	C3Y145_BRAFL	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (187 aa)
	C3Y3M2_BRAFL	Uncharacterized protein. (368 aa)
	C3Y3P1_BRAFL	Uncharacterized protein. (1980 aa)
	C3Y3W0_BRAFL	Uncharacterized protein. (678 aa)
	C3Y4B2_BRAFL	Inos-1-P_synth domain-containing protein. (552 aa)
	C3Y5B0_BRAFL	Inos-1-P_synth domain-containing protein. (492 aa)
	C3Y5R0_BRAFL	Uncharacterized protein. (242 aa)
	C3Y744_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (595 aa)
	Slc6a15	Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (733 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPZ3_BRAFL	C3XW30_BRAFL	C3XPZ3	C3XW30	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Phosphoglycerate kinase.	0.771
C3XPZ3_BRAFL	C3XYH6_BRAFL	C3XPZ3	C3XYH6	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Triosephosphate isomerase.	0.746
C3XPZ3_BRAFL	C3YIV5_BRAFL	C3XPZ3	C3YIV5	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Aminotran_1_2 domain-containing protein.	0.571
C3XPZ3_BRAFL	C3YV81_BRAFL	C3XPZ3	C3YV81	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.959
C3XPZ3_BRAFL	C3Z4S2_BRAFL	C3XPZ3	C3Z4S2	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.570
C3XPZ3_BRAFL	C3Z5S9_BRAFL	C3XPZ3	C3Z5S9	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Aamy domain-containing protein.	0.452
C3XPZ3_BRAFL	C3ZBX8_BRAFL	C3XPZ3	C3ZBX8	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.793
C3XRT4_BRAFL	C3YJ26_BRAFL	C3XRT4	C3YJ26	RmlD_sub_bind domain-containing protein.	AFP-like domain-containing protein.	0.401
C3XRT4_BRAFL	C3YJ27_BRAFL	C3XRT4	C3YJ27	RmlD_sub_bind domain-containing protein.	NeuB domain-containing protein.	0.401
C3XRT4_BRAFL	C3Z3T4_BRAFL	C3XRT4	C3Z3T4	RmlD_sub_bind domain-containing protein.	PPC domain-containing protein.	0.546
C3XRT4_BRAFL	C3Z3T5_BRAFL	C3XRT4	C3Z3T5	RmlD_sub_bind domain-containing protein.	PPC domain-containing protein.	0.546
C3XRT4_BRAFL	C3ZKB8_BRAFL	C3XRT4	C3ZKB8	RmlD_sub_bind domain-containing protein.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.527
C3XW30_BRAFL	C3XPZ3_BRAFL	C3XW30	C3XPZ3	Phosphoglycerate kinase.	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	0.771
C3XW30_BRAFL	C3XYH6_BRAFL	C3XW30	C3XYH6	Phosphoglycerate kinase.	Triosephosphate isomerase.	0.999
C3XW30_BRAFL	C3YYV7_BRAFL	C3XW30	C3YYV7	Phosphoglycerate kinase.	Glyco_transf_20 domain-containing protein.	0.521
C3XW30_BRAFL	C3Z482_BRAFL	C3XW30	C3Z482	Phosphoglycerate kinase.	Malate dehydrogenase.	0.576
C3XW30_BRAFL	C3Z4S2_BRAFL	C3XW30	C3Z4S2	Phosphoglycerate kinase.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.538
C3XW30_BRAFL	C3Z5S9_BRAFL	C3XW30	C3Z5S9	Phosphoglycerate kinase.	Aamy domain-containing protein.	0.474
C3XW30_BRAFL	C3ZAU8_BRAFL	C3XW30	C3ZAU8	Phosphoglycerate kinase.	Uncharacterized protein.	0.499
C3XW30_BRAFL	C3ZBX8_BRAFL	C3XW30	C3ZBX8	Phosphoglycerate kinase.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.999