(18 nodes) RNA polymerase II general transcription initiation factor activity network (Branchiostoma floridae)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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Your Input:
	C3XWK5_BRAFL	TAFII55_N domain-containing protein. (381 aa)
	C3ZFY4_BRAFL	CBFD_NFYB_HMF domain-containing protein. (173 aa)
	C3ZFE4_BRAFL	Uncharacterized protein. (144 aa)
	C3ZEY7_BRAFL	TAF domain-containing protein. (653 aa)
	C3ZCV2_BRAFL	Uncharacterized protein. (205 aa)
	C3ZCP1_BRAFL	TFIIB-type domain-containing protein. (319 aa)
	C3Z5Q6_BRAFL	Uncharacterized protein. (71 aa)
	C3Z4S1_BRAFL	TAF domain-containing protein. (444 aa)
	C3Z2E0_BRAFL	HTH TFE/IIEalpha-type domain-containing protein. (429 aa)
	C3YVD4_BRAFL	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (298 aa)
	C3YTK8_BRAFL	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
	C3YQI6_BRAFL	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (534 aa)
	C3YD69_BRAFL	Uncharacterized protein. (573 aa)
	C3Y3A3_BRAFL	Uncharacterized protein. (2008 aa)
	C3Y0I0_BRAFL	Uncharacterized protein. (311 aa)
	C3Y0C1_BRAFL	Uncharacterized protein. (320 aa)
	C3XPP3_BRAFL	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (136 aa)
	C3XRL4_BRAFL	NB-ARC domain-containing protein. (1342 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPP3_BRAFL	C3XWK5_BRAFL	C3XPP3	C3XWK5	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAFII55_N domain-containing protein.	0.999
C3XPP3_BRAFL	C3Y0C1_BRAFL	C3XPP3	C3Y0C1	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.998
C3XPP3_BRAFL	C3Y0I0_BRAFL	C3XPP3	C3Y0I0	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.836
C3XPP3_BRAFL	C3Y3A3_BRAFL	C3XPP3	C3Y3A3	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.999
C3XPP3_BRAFL	C3YD69_BRAFL	C3XPP3	C3YD69	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.813
C3XPP3_BRAFL	C3YQI6_BRAFL	C3XPP3	C3YQI6	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.815
C3XPP3_BRAFL	C3YTK8_BRAFL	C3XPP3	C3YTK8	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.805
C3XPP3_BRAFL	C3YVD4_BRAFL	C3XPP3	C3YVD4	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.810
C3XPP3_BRAFL	C3Z2E0_BRAFL	C3XPP3	C3Z2E0	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	HTH TFE/IIEalpha-type domain-containing protein.	0.813
C3XPP3_BRAFL	C3Z4S1_BRAFL	C3XPP3	C3Z4S1	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF domain-containing protein.	0.986
C3XPP3_BRAFL	C3ZCP1_BRAFL	C3XPP3	C3ZCP1	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TFIIB-type domain-containing protein.	0.973
C3XPP3_BRAFL	C3ZCV2_BRAFL	C3XPP3	C3ZCV2	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.971
C3XPP3_BRAFL	C3ZEY7_BRAFL	C3XPP3	C3ZEY7	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF domain-containing protein.	0.999
C3XRL4_BRAFL	C3Y0C1_BRAFL	C3XRL4	C3Y0C1	NB-ARC domain-containing protein.	Uncharacterized protein.	0.991
C3XRL4_BRAFL	C3ZCP1_BRAFL	C3XRL4	C3ZCP1	NB-ARC domain-containing protein.	TFIIB-type domain-containing protein.	0.651
C3XRL4_BRAFL	C3ZCV2_BRAFL	C3XRL4	C3ZCV2	NB-ARC domain-containing protein.	Uncharacterized protein.	0.920
C3XRL4_BRAFL	C3ZFY4_BRAFL	C3XRL4	C3ZFY4	NB-ARC domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.996
C3XWK5_BRAFL	C3XPP3_BRAFL	C3XWK5	C3XPP3	TAFII55_N domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
C3XWK5_BRAFL	C3Y0C1_BRAFL	C3XWK5	C3Y0C1	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.998
C3XWK5_BRAFL	C3Y0I0_BRAFL	C3XWK5	C3Y0I0	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.845