(22 nodes) Somatic cell DNA recombination network (Branchiostoma floridae)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	C3XQC7_BRAFL	POLXc domain-containing protein. (186 aa)
	C3XTK2_BRAFL	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (905 aa)
	C3Y2A0_BRAFL	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1226 aa)
	C3Y3U5_BRAFL	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (303 aa)
	C3Y458_BRAFL	DNA_mis_repair domain-containing protein. (717 aa)
	C3Y937_BRAFL	Uncharacterized protein. (427 aa)
	C3Y9A3_BRAFL	ATPase_AAA_core domain-containing protein. (2025 aa)
	C3YDS9_BRAFL	Uncharacterized protein. (326 aa)
	C3YEQ0_BRAFL	DUF3342 domain-containing protein. (546 aa)
	C3YF62_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (311 aa)
	C3YF64_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4388 aa)
	C3YF65_BRAFL	Uncharacterized protein. (488 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YKZ1_BRAFL	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (264 aa)
	C3YM54_BRAFL	KH_dom_type_1 domain-containing protein. (186 aa)
	C3YMN6_BRAFL	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1278 aa)
	C3YPF6_BRAFL	LisH domain-containing protein. (1288 aa)
	C3YZ01_BRAFL	DNA ligase. (793 aa)
	C3Z4R4_BRAFL	TPR_REGION domain-containing protein. (698 aa)
	C3Z734_BRAFL	Uncharacterized protein. (275 aa)
	C3ZET3_BRAFL	RING-type domain-containing protein. (121 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQC7_BRAFL	C3Y3U5_BRAFL	C3XQC7	C3Y3U5	POLXc domain-containing protein.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.414
C3XQC7_BRAFL	C3YF62_BRAFL	C3XQC7	C3YF62	POLXc domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.406
C3XQC7_BRAFL	C3YF64_BRAFL	C3XQC7	C3YF64	POLXc domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.406
C3XQC7_BRAFL	C3YKZ1_BRAFL	C3XQC7	C3YKZ1	POLXc domain-containing protein.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.414
C3XQC7_BRAFL	C3YZ01_BRAFL	C3XQC7	C3YZ01	POLXc domain-containing protein.	DNA ligase.	0.740
C3XQC7_BRAFL	C3Z4R4_BRAFL	C3XQC7	C3Z4R4	POLXc domain-containing protein.	TPR_REGION domain-containing protein.	0.430
C3XQC7_BRAFL	C3Z734_BRAFL	C3XQC7	C3Z734	POLXc domain-containing protein.	Uncharacterized protein.	0.430
C3XTK2_BRAFL	C3Y2A0_BRAFL	C3XTK2	C3Y2A0	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.998
C3XTK2_BRAFL	C3Y458_BRAFL	C3XTK2	C3Y458	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_mis_repair domain-containing protein.	0.997
C3XTK2_BRAFL	C3Y937_BRAFL	C3XTK2	C3Y937	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.917
C3XTK2_BRAFL	C3YDS9_BRAFL	C3XTK2	C3YDS9	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.581
C3XTK2_BRAFL	C3YH71_BRAFL	C3XTK2	C3YH71	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.576
C3XTK2_BRAFL	C3YH73_BRAFL	C3XTK2	C3YH73	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	FAT domain-containing protein.	0.576
C3XTK2_BRAFL	C3YMN6_BRAFL	C3XTK2	C3YMN6	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.999
C3XTK2_BRAFL	C3YZ01_BRAFL	C3XTK2	C3YZ01	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA ligase.	0.791
C3XTK2_BRAFL	C3Z4R4_BRAFL	C3XTK2	C3Z4R4	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	TPR_REGION domain-containing protein.	0.961
C3XTK2_BRAFL	C3Z734_BRAFL	C3XTK2	C3Z734	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.961
C3Y2A0_BRAFL	C3XTK2_BRAFL	C3Y2A0	C3XTK2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.998
C3Y2A0_BRAFL	C3Y3U5_BRAFL	C3Y2A0	C3Y3U5	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.401
C3Y2A0_BRAFL	C3Y458_BRAFL	C3Y2A0	C3Y458	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_mis_repair domain-containing protein.	0.965