(45 nodes) Carboxy-lyase activity network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YHC7_BRAFL	Uncharacterized protein. (939 aa)
	C3ZZ27_BRAFL	Uncharacterized protein. (484 aa)
	C3ZXV8_BRAFL	OMPdecase domain-containing protein. (410 aa)
	C3ZXE0_BRAFL	Uncharacterized protein. (263 aa)
	C3ZXC6_BRAFL	Uncharacterized protein. (549 aa)
	C3ZWR9_BRAFL	Uncharacterized protein. (489 aa)
	C3ZS18_BRAFL	Uncharacterized protein. (480 aa)
	C3YBL4_BRAFL	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (224 aa)
	C3Y6S5_BRAFL	Uncharacterized protein. (502 aa)
	C3Y6S3_BRAFL	Uncharacterized protein. (136 aa)
	C3Y6S2_BRAFL	Uncharacterized protein. (142 aa)
	C3Y5S8_BRAFL	Uncharacterized protein. (893 aa)
	C3Y217_BRAFL	OHCU_decarbox domain-containing protein. (136 aa)
	C3Y174_BRAFL	Orn_Arg_deC_N domain-containing protein. (151 aa)
	C3Y173_BRAFL	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (259 aa)
	C3XXE7_BRAFL	Uncharacterized protein. (291 aa)
	C3XWS0_BRAFL	Uncharacterized protein. (424 aa)
	C3XVS8_BRAFL	Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (522 aa)
	C3XVR8_BRAFL	Uncharacterized protein. (330 aa)
	C3XVB8_BRAFL	Uncharacterized protein. (120 aa)
	C3XV55_BRAFL	Uncharacterized protein. (121 aa)
	C3XUZ7_BRAFL	OHCU_decarbox domain-containing protein. (184 aa)
	C3XSU2_BRAFL	Uncharacterized protein. (294 aa)
	C3ZAT5_BRAFL	Uncharacterized protein. (447 aa)
	C3ZAU8_BRAFL	Uncharacterized protein. (623 aa)
	C3ZED9_BRAFL	Uncharacterized protein. (479 aa)
	C3ZGP5_BRAFL	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (409 aa)
	C3ZH05_BRAFL	Uncharacterized protein. (525 aa)
	C3ZNS5_BRAFL	Uncharacterized protein. (424 aa)
	C3ZNT5_BRAFL	Malic enzyme. (594 aa)
	C3ZRR8_BRAFL	Uncharacterized protein. (489 aa)
	C3Z8J3_BRAFL	Flavoprotein domain-containing protein. (194 aa)
	C3Z7G1_BRAFL	Uncharacterized protein. (685 aa)
	C3Z4G4_BRAFL	Uncharacterized protein. (563 aa)
	C3Z2T5_BRAFL	Uncharacterized protein. (454 aa)
	C3Z0P5_BRAFL	Uncharacterized protein. (469 aa)
	C3YZC5_BRAFL	OHCU_decarbox domain-containing protein. (175 aa)
	C3YQT2_BRAFL	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (368 aa)
	C3YK11_BRAFL	NAD(P)-bd_dom domain-containing protein. (337 aa)
	C3YIX9_BRAFL	FAA_hydrolase domain-containing protein. (195 aa)
	C3XSS1_BRAFL	Uncharacterized protein. (538 aa)
	C3XQI2_BRAFL	Uncharacterized protein. (336 aa)
	C3YIV5_BRAFL	Aminotran_1_2 domain-containing protein. (412 aa)
	C3YGC1_BRAFL	HTTM domain-containing protein; Belongs to the glycosyltransferase 29 family. (881 aa)
	C3YI82_BRAFL	HPPK domain-containing protein. (737 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSS1_BRAFL	C3YIV5_BRAFL	C3XSS1	C3YIV5	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.816
C3XSS1_BRAFL	C3ZED9_BRAFL	C3XSS1	C3ZED9	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XSS1_BRAFL	C3ZH05_BRAFL	C3XSS1	C3ZH05	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XUZ7_BRAFL	C3YZC5_BRAFL	C3XUZ7	C3YZC5	OHCU_decarbox domain-containing protein.	OHCU_decarbox domain-containing protein.	0.903
C3XVB8_BRAFL	C3YIV5_BRAFL	C3XVB8	C3YIV5	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.908
C3Y173_BRAFL	C3Y174_BRAFL	C3Y173	C3Y174	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Orn_Arg_deC_N domain-containing protein.	0.941
C3Y173_BRAFL	C3YIV5_BRAFL	C3Y173	C3YIV5	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Aminotran_1_2 domain-containing protein.	0.569
C3Y173_BRAFL	C3ZXE0_BRAFL	C3Y173	C3ZXE0	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein.	0.565
C3Y173_BRAFL	C3ZXV8_BRAFL	C3Y173	C3ZXV8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	OMPdecase domain-containing protein.	0.412
C3Y174_BRAFL	C3Y173_BRAFL	C3Y174	C3Y173	Orn_Arg_deC_N domain-containing protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.941
C3Y174_BRAFL	C3YIV5_BRAFL	C3Y174	C3YIV5	Orn_Arg_deC_N domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.569
C3Y174_BRAFL	C3ZXE0_BRAFL	C3Y174	C3ZXE0	Orn_Arg_deC_N domain-containing protein.	Uncharacterized protein.	0.423
C3Y174_BRAFL	C3ZXV8_BRAFL	C3Y174	C3ZXV8	Orn_Arg_deC_N domain-containing protein.	OMPdecase domain-containing protein.	0.412
C3Y6S2_BRAFL	C3ZZ27_BRAFL	C3Y6S2	C3ZZ27	Uncharacterized protein.	Uncharacterized protein.	0.552
C3Y6S3_BRAFL	C3YIV5_BRAFL	C3Y6S3	C3YIV5	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.908
C3Y6S5_BRAFL	C3YIV5_BRAFL	C3Y6S5	C3YIV5	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.912
C3YIV5_BRAFL	C3XSS1_BRAFL	C3YIV5	C3XSS1	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.816
C3YIV5_BRAFL	C3XVB8_BRAFL	C3YIV5	C3XVB8	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.908
C3YIV5_BRAFL	C3Y173_BRAFL	C3YIV5	C3Y173	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.569
C3YIV5_BRAFL	C3Y174_BRAFL	C3YIV5	C3Y174	Aminotran_1_2 domain-containing protein.	Orn_Arg_deC_N domain-containing protein.	0.569