(5 nodes) Peptidyl-glutamine methylation network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XZF6_BRAFL	Uncharacterized protein. (315 aa)
	C3Y909_BRAFL	Deacetylase sirtuin-type domain-containing protein. (399 aa)
	C3ZN06_BRAFL	Uncharacterized protein. (123 aa)
	C3ZRS8_BRAFL	Uncharacterized protein. (193 aa)
	C3ZRS9_BRAFL	MTS domain-containing protein. (219 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZF6_BRAFL	C3ZN06_BRAFL	C3XZF6	C3ZN06	Uncharacterized protein.	Uncharacterized protein.	0.437
C3ZN06_BRAFL	C3XZF6_BRAFL	C3ZN06	C3XZF6	Uncharacterized protein.	Uncharacterized protein.	0.437
C3ZN06_BRAFL	C3ZRS8_BRAFL	C3ZN06	C3ZRS8	Uncharacterized protein.	Uncharacterized protein.	0.972
C3ZN06_BRAFL	C3ZRS9_BRAFL	C3ZN06	C3ZRS9	Uncharacterized protein.	MTS domain-containing protein.	0.972
C3ZRS8_BRAFL	C3ZN06_BRAFL	C3ZRS8	C3ZN06	Uncharacterized protein.	Uncharacterized protein.	0.972
C3ZRS8_BRAFL	C3ZRS9_BRAFL	C3ZRS8	C3ZRS9	Uncharacterized protein.	MTS domain-containing protein.	0.544
C3ZRS9_BRAFL	C3ZN06_BRAFL	C3ZRS9	C3ZN06	MTS domain-containing protein.	Uncharacterized protein.	0.972
C3ZRS9_BRAFL	C3ZRS8_BRAFL	C3ZRS9	C3ZRS8	MTS domain-containing protein.	Uncharacterized protein.	0.544