STRINGSTRING
C3YII8_BRAFL C3YII8_BRAFL C3XR93_BRAFL C3XR93_BRAFL C3XTK2_BRAFL C3XTK2_BRAFL C3ZQJ9_BRAFL C3ZQJ9_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3YII8_BRAFLCENP-C_C domain-containing protein. (1118 aa)
C3XR93_BRAFLDNA_mis_repair domain-containing protein. (362 aa)
C3XTK2_BRAFLDNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (905 aa)
C3ZQJ9_BRAFLUncharacterized protein. (707 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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