(20 nodes) Chondroitin sulfate biosynthetic process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z424_BRAFL	Uncharacterized protein. (175 aa)
	C3XQE4_BRAFL	Hexosyltransferase. (473 aa)
	C3Y8L7_BRAFL	Uncharacterized protein. (349 aa)
	C3Y8L8_BRAFL	Hexosyltransferase. (337 aa)
	C3YC23_BRAFL	UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (479 aa)
	C3YJA0_BRAFL	Uncharacterized protein. (851 aa)
	C3YQ05_BRAFL	Hexosyltransferase. (892 aa)
	C3Z2Z0_BRAFL	Carbohydrate sulfotransferase. (376 aa)
	C3Z420_BRAFL	Hexosyltransferase. (156 aa)
	C3Z422_BRAFL	Hexosyltransferase. (704 aa)
	C3Z423_BRAFL	Hexosyltransferase. (491 aa)
	C3Z425_BRAFL	Hexosyltransferase. (1149 aa)
	C3ZGI4_BRAFL	Carbohydrate sulfotransferase. (224 aa)
	C3ZR56_BRAFL	Hexosyltransferase. (547 aa)
	C3ZR58_BRAFL	Hexosyltransferase. (768 aa)
	C3ZRP6_BRAFL	Hexosyltransferase. (187 aa)
	C3ZUV1_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (458 aa)
	C3ZXI0_BRAFL	Hexosyltransferase. (736 aa)
	C3ZXI1_BRAFL	Hexosyltransferase. (732 aa)
	C3ZYQ3_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (335 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQE4_BRAFL	C3YQ05_BRAFL	C3XQE4	C3YQ05	Hexosyltransferase.	Hexosyltransferase.	0.908
C3XQE4_BRAFL	C3Z420_BRAFL	C3XQE4	C3Z420	Hexosyltransferase.	Hexosyltransferase.	0.914
C3XQE4_BRAFL	C3Z424_BRAFL	C3XQE4	C3Z424	Hexosyltransferase.	Uncharacterized protein.	0.933
C3XQE4_BRAFL	C3ZR58_BRAFL	C3XQE4	C3ZR58	Hexosyltransferase.	Hexosyltransferase.	0.916
C3XQE4_BRAFL	C3ZRP6_BRAFL	C3XQE4	C3ZRP6	Hexosyltransferase.	Hexosyltransferase.	0.924
C3Y8L7_BRAFL	C3YQ05_BRAFL	C3Y8L7	C3YQ05	Uncharacterized protein.	Hexosyltransferase.	0.447
C3Y8L7_BRAFL	C3Z424_BRAFL	C3Y8L7	C3Z424	Uncharacterized protein.	Uncharacterized protein.	0.461
C3Y8L7_BRAFL	C3ZRP6_BRAFL	C3Y8L7	C3ZRP6	Uncharacterized protein.	Hexosyltransferase.	0.489
C3Y8L8_BRAFL	C3ZRP6_BRAFL	C3Y8L8	C3ZRP6	Hexosyltransferase.	Hexosyltransferase.	0.475
C3YQ05_BRAFL	C3XQE4_BRAFL	C3YQ05	C3XQE4	Hexosyltransferase.	Hexosyltransferase.	0.908
C3YQ05_BRAFL	C3Y8L7_BRAFL	C3YQ05	C3Y8L7	Hexosyltransferase.	Uncharacterized protein.	0.447
C3YQ05_BRAFL	C3Z420_BRAFL	C3YQ05	C3Z420	Hexosyltransferase.	Hexosyltransferase.	0.901
C3YQ05_BRAFL	C3Z424_BRAFL	C3YQ05	C3Z424	Hexosyltransferase.	Uncharacterized protein.	0.902
C3YQ05_BRAFL	C3ZR58_BRAFL	C3YQ05	C3ZR58	Hexosyltransferase.	Hexosyltransferase.	0.918
C3YQ05_BRAFL	C3ZRP6_BRAFL	C3YQ05	C3ZRP6	Hexosyltransferase.	Hexosyltransferase.	0.902
C3Z420_BRAFL	C3XQE4_BRAFL	C3Z420	C3XQE4	Hexosyltransferase.	Hexosyltransferase.	0.914
C3Z420_BRAFL	C3YQ05_BRAFL	C3Z420	C3YQ05	Hexosyltransferase.	Hexosyltransferase.	0.901
C3Z420_BRAFL	C3Z424_BRAFL	C3Z420	C3Z424	Hexosyltransferase.	Uncharacterized protein.	0.918
C3Z420_BRAFL	C3ZR58_BRAFL	C3Z420	C3ZR58	Hexosyltransferase.	Hexosyltransferase.	0.917
C3Z420_BRAFL	C3ZRP6_BRAFL	C3Z420	C3ZRP6	Hexosyltransferase.	Hexosyltransferase.	0.900