8 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y0B9_BRAFL	Uncharacterized protein. (229 aa)
	C3Y330_BRAFL	Uncharacterized protein. (680 aa)
	C3YGA8_BRAFL	CBM21 domain-containing protein. (292 aa)
	C3YGA9_BRAFL	CBM21 domain-containing protein. (312 aa)
	C3YID9_BRAFL	Uncharacterized protein. (1932 aa)
	C3ZE63_BRAFL	CBM20 domain-containing protein. (316 aa)
	C3XVN9_BRAFL	Uncharacterized protein. (116 aa)
	C3XZT4_BRAFL	CBM21 domain-containing protein. (308 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZT4_BRAFL	C3YGA8_BRAFL	C3XZT4	C3YGA8	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.590
C3XZT4_BRAFL	C3YGA9_BRAFL	C3XZT4	C3YGA9	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.604
C3YGA8_BRAFL	C3XZT4_BRAFL	C3YGA8	C3XZT4	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.590
C3YGA8_BRAFL	C3YGA9_BRAFL	C3YGA8	C3YGA9	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.572
C3YGA9_BRAFL	C3XZT4_BRAFL	C3YGA9	C3XZT4	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.604
C3YGA9_BRAFL	C3YGA8_BRAFL	C3YGA9	C3YGA8	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.572