(49 nodes) Clathrin binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YZV8_BRAFL	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	C3YXU9_BRAFL	ENTH domain-containing protein. (623 aa)
	C3YWX3_BRAFL	ENTH domain-containing protein. (500 aa)
	C3YW93_BRAFL	ENTH domain-containing protein. (183 aa)
	C3YTZ4_BRAFL	Uncharacterized protein. (541 aa)
	C3YPZ4_BRAFL	C2 domain-containing protein. (262 aa)
	C3YNQ9_BRAFL	Uncharacterized protein. (121 aa)
	C3YGG4_BRAFL	AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (741 aa)
	C3YFZ3_BRAFL	Uncharacterized protein. (272 aa)
	C3Y938_BRAFL	Uncharacterized protein. (537 aa)
	C3Y4I4_BRAFL	Uncharacterized protein. (333 aa)
	C3Y2U6_BRAFL	Uncharacterized protein. (282 aa)
	C3Y1N3_BRAFL	Uncharacterized protein. (283 aa)
	C3Y0I1_BRAFL	Uncharacterized protein. (1805 aa)
	C3XY98_BRAFL	AP complex subunit beta. (944 aa)
	C3XXX7_BRAFL	PID domain-containing protein. (128 aa)
	C3XVA5_BRAFL	Uncharacterized protein. (1268 aa)
	C3XU80_BRAFL	Uncharacterized protein. (363 aa)
	C3XTT3_BRAFL	AP-1 complex subunit gamma. (846 aa)
	C3XSX7_BRAFL	Uncharacterized protein. (308 aa)
	C3YZW1_BRAFL	Uncharacterized protein. (107 aa)
	C3ZW38_BRAFL	Uncharacterized protein. (225 aa)
	C3ZW37_BRAFL	Uncharacterized protein. (373 aa)
	C3ZVY2_BRAFL	Uncharacterized protein. (919 aa)
	C3ZVY1_BRAFL	Protein kinase domain-containing protein. (149 aa)
	C3ZV86_BRAFL	Uncharacterized protein. (206 aa)
	C3ZV09_BRAFL	Uncharacterized protein. (151 aa)
	C3ZUK4_BRAFL	Uncharacterized protein. (183 aa)
	C3ZMU5_BRAFL	Clathrin_bdg domain-containing protein. (894 aa)
	C3ZMS0_BRAFL	ENTH domain-containing protein. (570 aa)
	C3ZLV4_BRAFL	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (351 aa)
	C3ZDI0_BRAFL	Uncharacterized protein. (147 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3Z9A8_BRAFL	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1533 aa)
	C3Z978_BRAFL	C2 domain-containing protein. (162 aa)
	C3Z977_BRAFL	C2 domain-containing protein. (143 aa)
	C3Z6W2_BRAFL	Uncharacterized protein. (430 aa)
	C3Z6K0_BRAFL	Uncharacterized protein. (269 aa)
	C3Z6H6_BRAFL	Uncharacterized protein. (334 aa)
	C3Z570_BRAFL	Uncharacterized protein. (720 aa)
	C3Z4L9_BRAFL	Uncharacterized protein. (413 aa)
	C3Z4L8_BRAFL	C2 domain-containing protein. (444 aa)
	C3Z4L7_BRAFL	C2 domain-containing protein. (129 aa)
	C3Z3W7_BRAFL	TSNAXIP1_N domain-containing protein. (582 aa)
	C3Z3J8_BRAFL	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	C3Z1G4_BRAFL	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (950 aa)
	C3ZYH2_BRAFL	Uncharacterized protein. (113 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSX7_BRAFL	C3XTT3_BRAFL	C3XSX7	C3XTT3	Uncharacterized protein.	AP-1 complex subunit gamma.	0.433
C3XSX7_BRAFL	C3XVA5_BRAFL	C3XSX7	C3XVA5	Uncharacterized protein.	Uncharacterized protein.	0.455
C3XSX7_BRAFL	C3XY98_BRAFL	C3XSX7	C3XY98	Uncharacterized protein.	AP complex subunit beta.	0.438
C3XSX7_BRAFL	C3Y0I1_BRAFL	C3XSX7	C3Y0I1	Uncharacterized protein.	Uncharacterized protein.	0.423
C3XSX7_BRAFL	C3YGG4_BRAFL	C3XSX7	C3YGG4	Uncharacterized protein.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.438
C3XSX7_BRAFL	C3YZV8_BRAFL	C3XSX7	C3YZV8	Uncharacterized protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.627
C3XSX7_BRAFL	C3Z3J8_BRAFL	C3XSX7	C3Z3J8	Uncharacterized protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.466
C3XSX7_BRAFL	C3Z3W7_BRAFL	C3XSX7	C3Z3W7	Uncharacterized protein.	TSNAXIP1_N domain-containing protein.	0.590
C3XSX7_BRAFL	C3Z9A8_BRAFL	C3XSX7	C3Z9A8	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.590
C3XSX7_BRAFL	C3ZLV4_BRAFL	C3XSX7	C3ZLV4	Uncharacterized protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.501
C3XSX7_BRAFL	C3ZVY1_BRAFL	C3XSX7	C3ZVY1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.652
C3XSX7_BRAFL	C3ZVY2_BRAFL	C3XSX7	C3ZVY2	Uncharacterized protein.	Uncharacterized protein.	0.652
C3XTT3_BRAFL	C3XSX7_BRAFL	C3XTT3	C3XSX7	AP-1 complex subunit gamma.	Uncharacterized protein.	0.433
C3XTT3_BRAFL	C3XVA5_BRAFL	C3XTT3	C3XVA5	AP-1 complex subunit gamma.	Uncharacterized protein.	0.717
C3XTT3_BRAFL	C3XY98_BRAFL	C3XTT3	C3XY98	AP-1 complex subunit gamma.	AP complex subunit beta.	0.992
C3XTT3_BRAFL	C3Y0I1_BRAFL	C3XTT3	C3Y0I1	AP-1 complex subunit gamma.	Uncharacterized protein.	0.444
C3XTT3_BRAFL	C3Y4I4_BRAFL	C3XTT3	C3Y4I4	AP-1 complex subunit gamma.	Uncharacterized protein.	0.491
C3XTT3_BRAFL	C3YGG4_BRAFL	C3XTT3	C3YGG4	AP-1 complex subunit gamma.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.981
C3XTT3_BRAFL	C3YNQ9_BRAFL	C3XTT3	C3YNQ9	AP-1 complex subunit gamma.	Uncharacterized protein.	0.433
C3XTT3_BRAFL	C3YTZ4_BRAFL	C3XTT3	C3YTZ4	AP-1 complex subunit gamma.	Uncharacterized protein.	0.491