(26 nodes) Cholesterol transport network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XSG8_BRAFL	LIM zinc-binding domain-containing protein. (87 aa)
	C3XSG7_BRAFL	LIM zinc-binding domain-containing protein. (84 aa)
	C3ZSN0_BRAFL	SSD domain-containing protein. (1368 aa)
	C3ZVX5_BRAFL	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (540 aa)
	C3ZXV0_BRAFL	LRRNT domain-containing protein. (531 aa)
	C3ZYE4_BRAFL	MIT domain-containing protein. (115 aa)
	C3ZZI9_BRAFL	Uncharacterized protein. (335 aa)
	C3ZZZ0_BRAFL	Uncharacterized protein. (525 aa)
	C3ZZJ3_BRAFL	Uncharacterized protein. (314 aa)
	C3ZNK2_BRAFL	Uncharacterized protein. (728 aa)
	C3ZLN9_BRAFL	ABC transporter domain-containing protein. (840 aa)
	C3ZJ94_BRAFL	Uncharacterized protein. (200 aa)
	C3ZHW4_BRAFL	Uncharacterized protein. (205 aa)
	C3Z6K0_BRAFL	Uncharacterized protein. (269 aa)
	C3Z332_BRAFL	Uncharacterized protein. (829 aa)
	C3YSP7_BRAFL	ABC transporter domain-containing protein. (778 aa)
	C3YPS7_BRAFL	Uncharacterized protein. (480 aa)
	C3YGF1_BRAFL	LisH domain-containing protein. (1087 aa)
	C3YEH0_BRAFL	Uncharacterized protein; Belongs to the AAA ATPase family. (440 aa)
	C3Y760_BRAFL	ABC transporter domain-containing protein. (755 aa)
	C3Y1R0_BRAFL	Spatacsin_C domain-containing protein. (1876 aa)
	C3Y0B1_BRAFL	ML domain-containing protein. (138 aa)
	C3Y0B0_BRAFL	ML domain-containing protein. (150 aa)
	C3XZG2_BRAFL	ML domain-containing protein. (149 aa)
	C3XY10_BRAFL	LIM zinc-binding domain-containing protein. (78 aa)
	C3XSN2_BRAFL	Uncharacterized protein. (390 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSN2_BRAFL	C3ZSN0_BRAFL	C3XSN2	C3ZSN0	Uncharacterized protein.	SSD domain-containing protein.	0.435
C3XSN2_BRAFL	C3ZVX5_BRAFL	C3XSN2	C3ZVX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.511
C3XZG2_BRAFL	C3Y0B0_BRAFL	C3XZG2	C3Y0B0	ML domain-containing protein.	ML domain-containing protein.	0.903
C3XZG2_BRAFL	C3ZJ94_BRAFL	C3XZG2	C3ZJ94	ML domain-containing protein.	Uncharacterized protein.	0.481
C3XZG2_BRAFL	C3ZSN0_BRAFL	C3XZG2	C3ZSN0	ML domain-containing protein.	SSD domain-containing protein.	0.990
C3Y0B0_BRAFL	C3XZG2_BRAFL	C3Y0B0	C3XZG2	ML domain-containing protein.	ML domain-containing protein.	0.903
C3Y0B0_BRAFL	C3ZJ94_BRAFL	C3Y0B0	C3ZJ94	ML domain-containing protein.	Uncharacterized protein.	0.481
C3Y0B0_BRAFL	C3ZSN0_BRAFL	C3Y0B0	C3ZSN0	ML domain-containing protein.	SSD domain-containing protein.	0.990
C3Y0B1_BRAFL	C3ZJ94_BRAFL	C3Y0B1	C3ZJ94	ML domain-containing protein.	Uncharacterized protein.	0.481
C3Y0B1_BRAFL	C3ZSN0_BRAFL	C3Y0B1	C3ZSN0	ML domain-containing protein.	SSD domain-containing protein.	0.907
C3ZJ94_BRAFL	C3XZG2_BRAFL	C3ZJ94	C3XZG2	Uncharacterized protein.	ML domain-containing protein.	0.481
C3ZJ94_BRAFL	C3Y0B0_BRAFL	C3ZJ94	C3Y0B0	Uncharacterized protein.	ML domain-containing protein.	0.481
C3ZJ94_BRAFL	C3Y0B1_BRAFL	C3ZJ94	C3Y0B1	Uncharacterized protein.	ML domain-containing protein.	0.481
C3ZSN0_BRAFL	C3XSN2_BRAFL	C3ZSN0	C3XSN2	SSD domain-containing protein.	Uncharacterized protein.	0.435
C3ZSN0_BRAFL	C3XZG2_BRAFL	C3ZSN0	C3XZG2	SSD domain-containing protein.	ML domain-containing protein.	0.990
C3ZSN0_BRAFL	C3Y0B0_BRAFL	C3ZSN0	C3Y0B0	SSD domain-containing protein.	ML domain-containing protein.	0.990
C3ZSN0_BRAFL	C3Y0B1_BRAFL	C3ZSN0	C3Y0B1	SSD domain-containing protein.	ML domain-containing protein.	0.907
C3ZVX5_BRAFL	C3XSN2_BRAFL	C3ZVX5	C3XSN2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.511