(39 nodes) Growth cone network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZWT7_BRAFL	Uncharacterized protein. (92 aa)
	C3ZWT6_BRAFL	PDZ domain-containing protein. (90 aa)
	C3ZR40_BRAFL	Uncharacterized protein. (262 aa)
	C3ZR37_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	C3ZNB9_BRAFL	Stathmin; Belongs to the stathmin family. (175 aa)
	C3ZLU5_BRAFL	PH domain-containing protein. (629 aa)
	C3ZJM4_BRAFL	Ig-like domain-containing protein. (129 aa)
	C3ZJM3_BRAFL	Uncharacterized protein. (489 aa)
	C3ZJM2_BRAFL	Uncharacterized protein. (222 aa)
	C3ZEH7_BRAFL	Uncharacterized protein. (527 aa)
	C3ZD06_BRAFL	LRRNT domain-containing protein. (269 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3Z4Y1_BRAFL	Uncharacterized protein. (272 aa)
	C3Z3T3_BRAFL	Deacetylase sirtuin-type domain-containing protein. (325 aa)
	C3Z2C5_BRAFL	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (506 aa)
	C3YX69_BRAFL	BSD domain-containing protein. (263 aa)
	C3YW18_BRAFL	Uncharacterized protein. (165 aa)
	C3YS99_BRAFL	Uncharacterized protein. (455 aa)
	C3YK85_BRAFL	Microtubule-associated protein. (314 aa)
	C3YJ14_BRAFL	Sec8_exocyst domain-containing protein. (748 aa)
	C3YHD5_BRAFL	Uncharacterized protein. (312 aa)
	C3YHD4_BRAFL	Uncharacterized protein. (312 aa)
	C3YGW1_BRAFL	Uncharacterized protein. (513 aa)
	C3YGT9_BRAFL	Uncharacterized protein. (887 aa)
	C3YDV0_BRAFL	CRAL-TRIO domain-containing protein. (263 aa)
	C3Y9B1_BRAFL	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (655 aa)
	C3XPY9_BRAFL	Protein kinase domain-containing protein. (347 aa)
	C3XR14_BRAFL	Uncharacterized protein. (637 aa)
	C3XR19_BRAFL	WD_REPEATS_REGION domain-containing protein. (427 aa)
	C3Y348_BRAFL	Peptidylprolyl isomerase. (718 aa)
	C3Y3I3_BRAFL	Uncharacterized protein. (1461 aa)
	C3Y4P7_BRAFL	Zpr1 domain-containing protein. (262 aa)
	C3Y3S1_BRAFL	Uncharacterized protein. (567 aa)
	C3Y3S2_BRAFL	Uncharacterized protein. (610 aa)
	C3Y3S0_BRAFL	Uncharacterized protein. (586 aa)
	C3ZYI6_BRAFL	Uncharacterized protein. (369 aa)
	C3ZXX8_BRAFL	Protein kinase domain-containing protein. (283 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPY9_BRAFL	C3Z2C5_BRAFL	C3XPY9	C3Z2C5	Protein kinase domain-containing protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.520
C3XPY9_BRAFL	C3Z3T3_BRAFL	C3XPY9	C3Z3T3	Protein kinase domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.535
C3XPY9_BRAFL	C3Z4Y1_BRAFL	C3XPY9	C3Z4Y1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.431
C3XR14_BRAFL	C3XR19_BRAFL	C3XR14	C3XR19	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.967
C3XR19_BRAFL	C3XR14_BRAFL	C3XR19	C3XR14	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.967
C3Y9B1_BRAFL	C3YJ14_BRAFL	C3Y9B1	C3YJ14	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Sec8_exocyst domain-containing protein.	0.999
C3Y9B1_BRAFL	C3ZLU5_BRAFL	C3Y9B1	C3ZLU5	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	PH domain-containing protein.	0.998
C3YJ14_BRAFL	C3Y9B1_BRAFL	C3YJ14	C3Y9B1	Sec8_exocyst domain-containing protein.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.999
C3YJ14_BRAFL	C3ZLU5_BRAFL	C3YJ14	C3ZLU5	Sec8_exocyst domain-containing protein.	PH domain-containing protein.	0.999
C3YK85_BRAFL	C3Z2C5_BRAFL	C3YK85	C3Z2C5	Microtubule-associated protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.704
C3YK85_BRAFL	C3ZR37_BRAFL	C3YK85	C3ZR37	Microtubule-associated protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.817
C3Z2C5_BRAFL	C3XPY9_BRAFL	C3Z2C5	C3XPY9	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Protein kinase domain-containing protein.	0.520
C3Z2C5_BRAFL	C3YK85_BRAFL	C3Z2C5	C3YK85	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Microtubule-associated protein.	0.704
C3Z2C5_BRAFL	C3ZR37_BRAFL	C3Z2C5	C3ZR37	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.579
C3Z3T3_BRAFL	C3XPY9_BRAFL	C3Z3T3	C3XPY9	Deacetylase sirtuin-type domain-containing protein.	Protein kinase domain-containing protein.	0.535
C3Z4Y1_BRAFL	C3XPY9_BRAFL	C3Z4Y1	C3XPY9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.431
C3ZJM2_BRAFL	C3ZJM3_BRAFL	C3ZJM2	C3ZJM3	Uncharacterized protein.	Uncharacterized protein.	0.941
C3ZJM3_BRAFL	C3ZJM2_BRAFL	C3ZJM3	C3ZJM2	Uncharacterized protein.	Uncharacterized protein.	0.941
C3ZLU5_BRAFL	C3Y9B1_BRAFL	C3ZLU5	C3Y9B1	PH domain-containing protein.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.998
C3ZLU5_BRAFL	C3YJ14_BRAFL	C3ZLU5	C3YJ14	PH domain-containing protein.	Sec8_exocyst domain-containing protein.	0.999