(40 nodes) Adult behavior network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y2H9_BRAFL	Amino acid transporter. (522 aa)
	C3Y9H0_BRAFL	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (348 aa)
	C3XU54_BRAFL	Bardet-Biedl syndrome 2 protein homolog. (716 aa)
	C3XVY8_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
	C3XZS0_BRAFL	Uncharacterized protein. (957 aa)
	C3Y082_BRAFL	Uncharacterized protein. (964 aa)
	C3Y0L5_BRAFL	BTB domain-containing protein. (600 aa)
	C3Y282_BRAFL	WH1 domain-containing protein. (561 aa)
	C3Y5J2_BRAFL	TLC domain-containing protein. (278 aa)
	C3Y771_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (388 aa)
	C3Y7J6_BRAFL	Uncharacterized protein. (1619 aa)
	C3Y9G9_BRAFL	Uncharacterized protein. (112 aa)
	C3YCF0_BRAFL	Ncstrn_small domain-containing protein. (716 aa)
	C3YD64_BRAFL	Uncharacterized protein. (255 aa)
	C3YEG9_BRAFL	Uncharacterized protein. (425 aa)
	C3YNJ8_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (413 aa)
	C3YSJ4_BRAFL	Uncharacterized protein. (432 aa)
	C3YUG5_BRAFL	TLC domain-containing protein. (278 aa)
	C3YUH9_BRAFL	TLC domain-containing protein. (278 aa)
	C3YX63_BRAFL	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (354 aa)
	C3YYC7_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (303 aa)
	C3YYE4_BRAFL	Uncharacterized protein. (520 aa)
	C3YZW7_BRAFL	Uncharacterized protein. (257 aa)
	C3Z2B9_BRAFL	BBS1 domain-containing protein. (540 aa)
	C3Z4Y1_BRAFL	Uncharacterized protein. (272 aa)
	C3Z502_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
	C3Z564_BRAFL	Uncharacterized protein. (487 aa)
	C3Z5V6_BRAFL	Uncharacterized protein. (464 aa)
	C3Z5V7_BRAFL	Uncharacterized protein. (486 aa)
	C3Z6L3_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (283 aa)
	C3Z6L4_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (104 aa)
	C3Z7G3_BRAFL	Uncharacterized protein. (309 aa)
	C3Z7V3_BRAFL	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (344 aa)
	C3ZE86_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (290 aa)
	C3ZEW4_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (385 aa)
	C3ZGM5_BRAFL	Uncharacterized protein. (132 aa)
	C3ZLL9_BRAFL	Uncharacterized protein. (1174 aa)
	C3ZMS9_BRAFL	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (417 aa)
	C3ZR37_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	C3ZYE3_BRAFL	Uncharacterized protein. (475 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XU54_BRAFL	C3YEG9_BRAFL	C3XU54	C3YEG9	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.947
C3XU54_BRAFL	C3Z2B9_BRAFL	C3XU54	C3Z2B9	Bardet-Biedl syndrome 2 protein homolog.	BBS1 domain-containing protein.	0.995
C3XU54_BRAFL	C3ZYE3_BRAFL	C3XU54	C3ZYE3	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.947
C3Y7J6_BRAFL	C3ZR37_BRAFL	C3Y7J6	C3ZR37	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.403
C3Y9G9_BRAFL	C3Y9H0_BRAFL	C3Y9G9	C3Y9H0	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.508
C3Y9G9_BRAFL	C3Z7V3_BRAFL	C3Y9G9	C3Z7V3	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.491
C3Y9G9_BRAFL	C3ZMS9_BRAFL	C3Y9G9	C3ZMS9	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.513
C3Y9H0_BRAFL	C3Y9G9_BRAFL	C3Y9H0	C3Y9G9	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.508
C3Y9H0_BRAFL	C3Z7V3_BRAFL	C3Y9H0	C3Z7V3	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.902
C3Y9H0_BRAFL	C3ZMS9_BRAFL	C3Y9H0	C3ZMS9	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.901
C3YEG9_BRAFL	C3XU54_BRAFL	C3YEG9	C3XU54	Uncharacterized protein.	Bardet-Biedl syndrome 2 protein homolog.	0.947
C3YEG9_BRAFL	C3Z2B9_BRAFL	C3YEG9	C3Z2B9	Uncharacterized protein.	BBS1 domain-containing protein.	0.972
C3YYC7_BRAFL	C3ZE86_BRAFL	C3YYC7	C3ZE86	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.904
C3Z2B9_BRAFL	C3XU54_BRAFL	C3Z2B9	C3XU54	BBS1 domain-containing protein.	Bardet-Biedl syndrome 2 protein homolog.	0.995
C3Z2B9_BRAFL	C3YEG9_BRAFL	C3Z2B9	C3YEG9	BBS1 domain-containing protein.	Uncharacterized protein.	0.972
C3Z2B9_BRAFL	C3ZYE3_BRAFL	C3Z2B9	C3ZYE3	BBS1 domain-containing protein.	Uncharacterized protein.	0.972
C3Z7V3_BRAFL	C3Y9G9_BRAFL	C3Z7V3	C3Y9G9	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.491
C3Z7V3_BRAFL	C3Y9H0_BRAFL	C3Z7V3	C3Y9H0	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.902
C3Z7V3_BRAFL	C3ZMS9_BRAFL	C3Z7V3	C3ZMS9	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.901
C3ZE86_BRAFL	C3YYC7_BRAFL	C3ZE86	C3YYC7	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.904